Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00239 ATGCGTAGCCGGGGATCACAAAACCGGCTATCTGGTAACTCTTTTGGATCTCGAGTTTCTGCTCTTATCTTTACCATGATTGCTACCATGGCCACTATATATGTTGCCGGCCGGCTATGGCAGGATGCGCAGAGTAGGGTCTATTTAATCGAACAGCTTGAAAAAAGAACTTCTCAGGGTCATTCTGCCGTATCTGTTGATGATACACTGAAAATCATAACCTGCAGGGAACAGCAAAAGAAGTTGTCTGCTCTAGAGATGGAGTTATCTGCAGCTAGAAAGGAAGGGTTTGTTCCAAAGCAATTGTCAGCCAACGATGGGAAGCAACCTACAAAAAAGATACTTTCGGTTATTGGAATAATGACAACCTTTGGCCGAAAAAAGAATAGAGATGCAATTCGTAAGGCATGGATGCCATCAGGTGCATCTATAAAAAATCTCGCAGAACAGAAAGGCATCATTGTGAGATTTGTGATAGGAAGAAGTGCAAATCGTGGAGACAGTTTGGACAAAgagattgaaaaagaaaatagccAGACCAATGACTTCATCATTCTTGATGATCAAGTAGAGGCAGTTGAAGAGAATGCAAAAAAGACAAAGTCGTTCTTCATTTATGCTGTGGACAAATGGGATGCTGAATTTTATGCTAAGGTCAATGATGATGTCTATGTTAATCTTGATGCCCTTGGAGGAGTGCTTACTTCTCATTTGGACAAAACCCGTGTATATATTGGTTGTATGAAATCGGGCGAAGTTTTCTCTGAACCGTACTTTCGACATGCATCAGGAGAGGTCTATGTCATTTCAAAAGCATTGGCTCAGTTTATTTCAATAAACAGATTTATTCTCCGTACATATGCACACGATGATGTAAGTACTGGATCATGGTTTATTGGGCTGGATGTGATGCACATTGATGAAAATAAGTTTTGCTGCTCATCCTGGTCCTCAGGGGCAATTTGTGCAGGAGTATGA 978 0.4039 MRSRGSQNRLSGNSFGSRVSALIFTMIATMATIYVAGRLWQDAQSRVYLIEQLEKRTSQGHSAVSVDDTLKIITCREQQKKLSALEMELSAARKEGFVPKQLSANDGKQPTKKILSVIGIMTTFGRKKNRDAIRKAWMPSGASIKNLAEQKGIIVRFVIGRSANRGDSLDKEIEKENSQTNDFIILDDQVEAVEENAKKTKSFFIYAVDKWDAEFYAKVNDDVYVNLDALGGVLTSHLDKTRVYIGCMKSGEVFSEPYFRHASGEVYVISKALAQFISINRFILRTYAHDDVSTGSWFIGLDVMHIDENKFCCSSWSSGAICAGV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00239 325 Coils Coil 75 95 - -
Tsu05g00239 325 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 321 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tsu05g00239 325 Pfam Domain of unknown function (DUF4094) 17 94 IPR025298 -
Tsu05g00239 325 Pfam Galactosyltransferase 129 255 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tsu05g00239 325 Pfam Galactosyltransferase 256 307 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tsu05g00239 325 PANTHER HEXOSYLTRANSFERASE 1 321 - -
Tsu05g00239 325 Gene3D - 106 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00239 Tsu-Chr5 1752670 1758514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00239 22 325 Glycosyltransferase AT5G53340 64.486 1.35e-153 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00239 K20854 - gmx:100802753 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00239 05 1752670 1758514 Tsu05g00239 05 1752670 1758514 ECH