Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00203 ATGGCCTCTGTGAATGACTATTTTCACCTCTCTGGACCCTCACATCTAACTTGTGTCAATTGGAATGATCCATATCATCGAAAGTCAATAGCTGCTAGTTTGGTCAAAGGGGTTTATGTTCTAGAAAAAGACCGCCAAGAACAACGAAAAGGCCCCAAGTCTCTAGCACCTCCTTGGTGGACATCCTTTCATTTTCAGCTGAAAGATACACTAGTTGATGGTACTTCCATATTTGGTGCTATTTTTGAGTACAAGCCTCCACCGTCAATAGGCAACAACCCCTTACATAGAAGTCCACGTTATGTAATTGCATTTCGAGGGACTATAAAAAAACTAGACTCAATTTTTCGCGATATGAAGTTGAATCTACAAATTGCCATACATGGACTTCATCGAACTTCACGCTCGAAGATAGCTACCGAAACTGTAAGAAACATGGTGGCTAGTGTTGGTGGCAATGGTTCCAACATATGGTTGGCTGGTCATTCTCTAGGATCATGCATCGCTTTGCTTGCCGGCAAAACAATGGCTAAAAGTGGCATATTCATTGAGTCCTTTCTTTTCAACCCTCCATTTCTATCTGCTCCAATTGATCAGATAATTAACTGTGAGGGAATGAAACATGGGATTCGAATTATCGGCAGCATTCTAACATCCGCCACAGTTGCCATTGCTGTGAATTTGGATATGCAAAGTTCATACTTAACTTCATTTGCTACTATGTCTGAATGGATTCCAAGCTTATTTGTGAATCGATTTGACTATATATGTTCGGAATATGTCGGATACTTCGAACATAGAAGAAAAATGGAGGAGATTGGTGCTGGAAGCATTGGAAAGATAGCAACACAAAACTCAGTTGGTTCTCTAATGATGAGTGCTTTTGGGAAGGAATCTGAACCTCTGCATCTGATTCCTTCAGCTATTTTGACAGTAAATTTGACCCCTTCAAAGAGTTTCAAAGAAGCTCATGGGATTCACCAATGGTGGAAACCAGACTTACACTTGGAATCCAATATTTCCATTCTTATTCTCTTCTTTGGAGTTCTCCTTTCTCTATGGCTTATTTCTTCTACTTCTACTAGTGTCTATGTGAAGAATTAA 1104 0.3995 MASVNDYFHLSGPSHLTCVNWNDPYHRKSIAASLVKGVYVLEKDRQEQRKGPKSLAPPWWTSFHFQLKDTLVDGTSIFGAIFEYKPPPSIGNNPLHRSPRYVIAFRGTIKKLDSIFRDMKLNLQIAIHGLHRTSRSKIATETVRNMVASVGGNGSNIWLAGHSLGSCIALLAGKTMAKSGIFIESFLFNPPFLSAPIDQIINCEGMKHGIRIIGSILTSATVAIAVNLDMQSSYLTSFATMSEWIPSLFVNRFDYICSEYVGYFEHRRKMEEIGAGSIGKIATQNSVGSLMMSAFGKESEPLHLIPSAILTVNLTPSKSFKEAHGIHQWWKPDLHLESNISILILFFGVLLSLWLISSTSTSVYVKN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00203 367 SUPERFAMILY alpha/beta-Hydrolases 42 194 IPR029058 -
Tsu05g00203 367 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 339 - -
Tsu05g00203 367 Gene3D alpha/beta hydrolase 88 263 IPR029058 -
Tsu05g00203 367 PANTHER LIPASE CLASS 3-LIKE 3 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00203 Tsu-Chr5 1465604 1468512 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00203 6 339 Acyl Lipid Metabolism Gene Families AT5G24180 46.628 7.99e-96 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00203 - - gmx:100786952 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00203 05 1465604 1468512 Tsu05g00203 05 1465604 1468512 ECH
Tsu05g00203 05 1465604 1468512 Tsu02g00361 02 3032273 3035544 PCT