Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00197 ATGGATTCCAATACTATAACAATATCAATTATACTATCTTTGATCATCTTATTCAATCTCTCAATTGCACAACAAGAACCCGTTATTCCTCCTCTAGCTCCTGCTTTGTTCGTCATCGGAGACTCCTCCGTTGATTCCGGTACCAACAATTTTCTTGGTACATTTGCTCGTTCCGATCGTCTTCCTTATGGCAGAGACTTTGACACTCATCAACCAACTGGAAGATTCTCCAATGGAAGAATACCCGTTGATTATCTTGcGTTGCGTCTCGGACTTCCTTTTGTGCCAAGTTATCTTGGGCAAGCAGGAAATGTGAAGGATATGATTCATGGTGTGAATTATGCTTCTGCTGGTGCAGGCATTATTGCCATAAGTGGCTCTGAATTGGGCCAACATATCTCCTTAACCcatcaaattcaacaatttaCTGACACATATCAGCAGTTTATATTAAGTATGGGAGAGGATGCTGCAAACACTTTCATATCCAATTCTATCTTTTATATCTCTATTGGAATTAATGACTACATTCACTATTATTTGCTCAATGTATCCAATGTCAATAATCTGTATCTTCCATGGCACTTCAACCAGCTTTTAGCATTTTCACTCAGGCAAGAAATAAAGAACTTGTACAACTTAAATGTTAGGAAAATGGTGGTCATGGGACTTGCACCTATTGGTTGTGCCCCTCGCTACATGTGGGAGTACGGTACTGAGAATGGAGATTGTGTTGAACCGATAAATGACATGTCCATTGAGTTTAACTTTCTCATGAGATACATTGTTGAAAAGCTTGCTGAGGAGCTCCCTGATGCCAATATAATCTTCTGTGATGTGTATGAAGGTTCCATGGATATTTTGAACAATCATAATCATTATGGCTTTAACGTCACGTCCGAGGCCTGCTGTGGATTTGGGAAGTACAGGGGTTGGTTGATGTGCTTATCGCCGGAAATGGCGTGCAGTAATGCTTCCAACTATATCTGGTGGGACCAGTTCCATCCAACTGATACAGTGAATGGAATTCTGGCTGATAATATATGGAATGGTGAGCACACTAAAATGTGCTATCCTATGCACTTGCAGGACATGGTAAATCAGAAGGCAAAATGA 1116 0.3996 MDSNTITISIILSLIILFNLSIAQQEPVIPPLAPALFVIGDSSVDSGTNNFLGTFARSDRLPYGRDFDTHQPTGRFSNGRIPVDYLALRLGLPFVPSYLGQAGNVKDMIHGVNYASAGAGIIAISGSELGQHISLTHQIQQFTDTYQQFILSMGEDAANTFISNSIFYISIGINDYIHYYLLNVSNVNNLYLPWHFNQLLAFSLRQEIKNLYNLNVRKMVVMGLAPIGCAPRYMWEYGTENGDCVEPINDMSIEFNFLMRYIVEKLAEELPDANIIFCDVYEGSMDILNNHNHYGFNVTSEACCGFGKYRGWLMCLSPEMACSNASNYIWWDQFHPTDTVNGILADNIWNGEHTKMCYPMHLQDMVNQKAK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00197 371 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 28 367 - -
Tsu05g00197 371 Gene3D SGNH hydrolase 31 353 IPR036514 -
Tsu05g00197 371 CDD SGNH_plant_lipase_like 34 351 IPR035669 -
Tsu05g00197 371 SUPERFAMILY SGNH hydrolase 35 350 - -
Tsu05g00197 371 Pfam GDSL-like Lipase/Acylhydrolase 36 347 IPR001087 GO:0016788
Tsu05g00197 371 PANTHER OS02G0290900 PROTEIN 28 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00197 Tsu-Chr5 1436246 1438315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00197 23 367 Acyl Lipid Metabolism Gene Families AT4G10950 69.164 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00197 - - gmx:100788021 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00197 05 1436246 1438315 Tsu05g00197 05 1436246 1438315 ECH