Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04588 ATGGCTGAAGTTTACACTCTAGTTGTCAGGAAACCTTGTTTTGATCTTCCAACCGGTTGCCCACAATGTCTCTCTGCTTTCATCTATCTCAATTTCGCTAAAATTCCTTTTCAATTGGATTTTCACCTAAACCATCCACATTCTGATAAAATTCCTTACATTGAGATTGGTGATGATTATGTGGCATATGATAATGAGAATGGTGGGATTATTGAGTGTTTAAAGAAAGATGTTGGTGTTGTTGATTTAGATAGTGAAGTTTCTTCACTTCCTGATTGGGTATCAATCAAAGCAATTCTTACAACTTGGCTTCATGATGCACTTGTTTATGAGCTTTGGATTGGATCTGAAGGTTCATCTGCTTATAGTATATATTATTCTGATCTTCCTTGGCCTATTGGGAAGATTCTGTCTTCGAAGAAAGCTCGTTGGGTAAAATCAAAACATGGGATAACTGATGACAATGCTGTAGTCAAGCAAGAAGAGATTTATGCGAGGGCAAGCTATGCTTATGATGCTctatcaaaattgttaggtgAAAAGAACTACCTATTTGAGAACAGCCCATCAAGTTTGGATGCTATTTTTCTTGCACATGGACTTGTTGTTCTTCAAGCTTTACCGGAATCTTCAACATTGCGGATCAAATTTTCGGAACATGATAATTTAGTTAGATATGTGCAAAAATGTAAGACCGAACTTAAAGAAGCTGGTCCACAATCTCATACAAATGCATCACCATCGGGCTCCAGAAGTCAATCAACCAAGAgACCAAAGGCTAAGAGCGTACCCAAAAGGGAGAAATCAGAGGCGGAGAAAACCTTTAAAAGGAGGGGAAGCTATTTTGTGGCAGCACAGTTGGTTGCAGTTGTTGTTTACCTCACACTTATGTTGACATTTGATGGTACTGAAGTGGAGATAGAAAATGATGTTGATGGAGATCTTGATCTATAG 954 0.3753 MAEVYTLVVRKPCFDLPTGCPQCLSAFIYLNFAKIPFQLDFHLNHPHSDKIPYIEIGDDYVAYDNENGGIIECLKKDVGVVDLDSEVSSLPDWVSIKAILTTWLHDALVYELWIGSEGSSAYSIYYSDLPWPIGKILSSKKARWVKSKHGITDDNAVVKQEEIYARASYAYDALSKLLGEKNYLFENSPSSLDAIFLAHGLVVLQALPESSTLRIKFSEHDNLVRYVQKCKTELKEAGPQSHTNASPSGSRSQSTKRPKAKSVPKREKSEAEKTFKRRGSYFVAAQLVAVVVYLTLMLTFDGTEVEIENDVDGDLDL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04588 317 MobiDBLite consensus disorder prediction 235 272 - -
Tsu04g04588 317 Pfam Glutathione S-transferase, C-terminal domain 169 229 IPR033468 -
Tsu04g04588 317 PANTHER METAXIN RELATED 1 313 - -
Tsu04g04588 317 PIRSF Metaxin 1 314 IPR017410 GO:0001401|GO:0007005
Tsu04g04588 317 PANTHER PROTEIN, PUTATIVE-RELATED 1 313 - -
Tsu04g04588 317 CDD GST_C_Metaxin 162 227 - -
Tsu04g04588 317 SUPERFAMILY GST C-terminal domain-like 160 231 IPR036282 -
Tsu04g04588 317 MobiDBLite consensus disorder prediction 237 257 - -
Tsu04g04588 317 Pfam Glutathione S-transferase N-terminal domain 21 117 IPR012336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04588 Tsu-Chr4 53462729 53465460 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04588 K17776 - gmx:100807761 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04588 04 53462729 53465460 Tsu04g04588 04 53462729 53465460 ECH
Tsu04g04588 04 53462729 53465460 Tsu07g02345 07 26730687 26736756 PCT