Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04507 ATGGCGACATCTAGTAAGTTTGATCCATCTTCCAGTAGCCCAGATAGACCACTGTACACTGCACAGCGTGGATCCAACATAGCTGCTTCATTAGATAGATCAGGTAGCTTTCGAGAATGCATGGAAAATCCAATTCTGTCTTCTCTGCCCAACATGTCGAGAAGTAGTTCTCCAGCAACACACGGGGATGTGGACAGCTTCTTCAATTATGTGCATTTTGATCAAAAGTTGCTAGTACTAGATCAAAAGTATAATCGTCACGTGGATTATAAGCGACATGTTAATGCTGCTCTTGGAATTTCACCCGATGAATCTCCATCTAGTTCTGCAAAAGGAAAGCTACTGCCATCCCCAGTACCAGAAGATGTAAAGCGTATGAGGGATAATTTGTATTCAAACAGTGTGAAGGCGAGGGAACGTGGGAAAATGTTCAATGAGGCCTTATCTGTATTCAATGAAGTTTTCCCAACTGTAAATGTGAAGAAGAGATCTCGAGTTGAAGGGTTTTCCAGTGATCGTTCTAGTGTCTTGTTAAATGACCGCTCAGTCTCGGGGCCAAGCATGGGTAAGGTTGGTGTTCAAGGTCATCCTGTCACTGGTGGTTTTGAACTAGATCAGCAAAAGTCGGAAGAAAGGACCAAACATCTTGGTCCAAACAAGCGTCCTCGAACTTCTATGGTTGATTTAAAGATGGATGTACGTACCAATTCTCTTGTCAGGCCACCGGGGACTGTTGATAGAGATAAGGAAAAGCTACGGATTGCCAACAATGGTGTAGTTCAGAGTGAAGAACGAAGCTTGCCTATTGTAGGTGATGGTTGGGAAACGtcaaaaatgaagaagaagaagcgtTCATGCATCAAACTAGACGTTTCTCCAAGTACTGCATTGAATAAACCTGTTAATGGTTTCCAGGAAACAAAACAAGGAATGCAACAACGACTTGCTACTGATTCTCGGTCGAAATTGAGTAACGATTCTAATTCTTTTAGGCTGGGAGTTTCTAATGGAACTGTTGCAGCTGGTAAATCAGATGGAATCTCTCAACAGACTGGGTTGGGTATACGTACCCCTATCCAAAGAAACGGACAAGATAATAATTCCCTTGTCAGCGATAAGCGGGGCCGTTCTGTTAGTTCAGAAAAGGAGAGGGTGACCTTCAGAGCTGTTAACAAGGCAACAGTTCGTGATGAGTTCAATTCATCTAGCCCTACCTCAAGTACTAAAATGAATACTGCAATTCGGGCTCCACGGTCAAGTTCAGGAGTTGCCCCCAAGATGTCACCAGTTGTCCATAGAACAGCTGTTCCTAATGATTGGGAGCTTTCTCATTGCGCCACAAAGCCCCCAGCTGGTGTTAGCAGTACTAACAATCGCAAACGTGCGGCAGCGGCACGGTCATCTTCCCCGCCTGTTGTCCCATGGCAGAGGCCACAAAAGAGCTCTCGGACTGCCAGAAGAACAAGTTTCGTGCCTGTTGTTTCGAGTAATGATGAAGCTCCTGCCTTGGATGCTGTTTCTGATGTTGCTGGTAATGATATTGGGATAGGATTTGTGAGACGCTCAGCTTGCAGTTCTCCTCAGCAAATCAAATTAAAAGGCGAACCTTCTCCTTCAGCGGCTTTATCTGAAAGTGAAGAGTCTGGGCTGGCTGAGGTTAAACCTAAAGAAAAGGGTAGGAAACCAGAAGAGATAGATCTGAAAGCTGGACAAAATGTTCCAAAGGTCTCTAACTTGGTCACTAGAAAGAGTAAGCTTGTTTCTGGGGAAGAACTTGGTGATGGTGTTCGGAGGCAAGGCAGGACGGGGCGCAGTTTCAATGCCACAAGGTCACTGACACCAATGACATCTGAAAAGCTTGGAAATATAGGAACTGCGAAACAATTAAGAAGTGCAAGACTAGGATGTGATAAGAATGAAAGCAAGGTGGGTCGTCCACCAACAAGGAAACTTTCTGATCGTAAGGCCTATGCTCGTCAAAAGCCTACTGCCATCAGCGCAGCAGCAGATTATTTTGTTGGGTCAGAAGACGGACACGGAGAGCTATTGGCTGCTGTAAAGGGTGTTATCAACTCTGTCTATTCCTTCTCCAGCCCCTTTTGGAAGCAGATGGAACCTTTCTTCAGTTTGATATCTGAGGATGATATTACTTACTGGAAGCAGAAGGTAACTCTTGAATCAAGCACTCTGATGCCAACTCCAGTTCCTTCAAATATAGATGGTTGTGAAACCATTGTTAATAGATATGGATTGGTTGACTGTGAAAGAAATGCCAGGTCTGATGTTCGACGTAGTGCTGGTACTAATACAGAAAATTTACCACTGCCCAAGGGAGGTCATAACATGGTACCTCTCTGTCAACGGCTTATAGCTGCTTTGATATCAGAGGAAGATCGTAGTGTTGGAAATGAAGATTTCAAGTTTGATGCATATGATACCGAATCTGAGCCTGATGGAGAATTAGAATTGAGTGGTTTAGATTGCCGCTCACTAACTAATTTTCAGTTTGCTCGTCATTCTGCTTATAATGGTTATGGGGTTATTGGGAAGCCGACACATGATGAAACTGAAAGTGATATGATTGATATTCCTAATTTTGGGTTGAATCCAAGCTTTGGCAACTCGGTAAATGGTTTTCTTCATGATAAAACATTGATGTCTGGCCTGGCTTGTTCAGAGTTGCAATACAATAACTTGGGTATAAATGATAAGCTTTTATTGGAGCTTCAAAGTATTGGACTTGACCTAGAACCAGTGcCTGAAATGGtgcaagaagatgatgaagccATATTGGAGGATATTACTAGGTTAGACGAGCTTTATCAAGAACAGGTTTCCAAGAAGAAAAACTTGCTAGATGGATTGTTGAAATCTGCGTCAGCAGCAAAAGAACTTCAGGAGAAGGATTTTGATCAACGTGCTCTAGATCAACTTGTTGTGACAGCTTATGAGAAATACACGGCTTGTCGGGGTTCTAGTGCCTCGGGTGGGAAAAATTCAAGCAACAACAAAATGGTCAAGCAAGCTGCATTGGCATTTGTTAAATGGACGTTGGAACAATACCACCAATTTGAAGATACGGGCAAGAGCTGTTTCAGTGAGCCTTTATTCAAGGATATGTTCCTTACTGCTTCTTCCCAGCATAGTATTGTTCGGCAATCAGATGGATTGGAGGCTGATTCCAGAAAACCATATACCTCTTCCCTGCCTCTGAAAGCAACAACAGCTTCCATGGGTTCACAGCAGAGCCCGTCACAATTTTATCAGAATATGGATAATCTTGATCTTACTTCATCAGATATGCTTCCTGCTTTAAATCATTCATCTGAACAAACCACTGGCAAGGAAGATTTGTGGGCAAACAGGGTGAAGAAGAGAGAATTGTTCCTCGATGATGTCGGGGGTACTCAAGGTAATTCAAGTGCTCCGGGCATTGGAAGTTCTCTAACAAGCAGTGCAAAAGGAAAAAGGAGCGATAGGGACAGAGATGGAAAGGGGCATGGCAGAGAGGTACTATCCAGAAATGGAACTACGAAAGCTGGTAGGCAAGCATCATCCAGTGctaaaggagaaagaaaagccAAAACAAAACCTAAGCAGAAAGCAACTCAGCATTCTGTTTCTGTAAATGGCCTCCTTGGCAAGTTGTCAGAGCAACCAAAACCAGCATTGCCTTCTGTTTCAAAACCTGTCGAAAAGCCTAGTAATAGAAATGCCAAGGAAAAGGATGAGTTTTTGGGTGGATTTGATGAGCCAATTGATTTGTCCAACCTGCAGCTTCCTGGAATGGATGTGCTCGGCGATCCTGGTGACCTTGCTGACCAAGGTCAAGATCTTGGTTCATGGTTGAATATTGATGACGATGTATTACAAGATCATGATGACTTTATGGGCCTTGAAATTCCCATGGATGACCTTTCAGACTTGAATATGATGGTTTGA 3942 0.4277 MATSSKFDPSSSSPDRPLYTAQRGSNIAASLDRSGSFRECMENPILSSLPNMSRSSSPATHGDVDSFFNYVHFDQKLLVLDQKYNRHVDYKRHVNAALGISPDESPSSSAKGKLLPSPVPEDVKRMRDNLYSNSVKARERGKMFNEALSVFNEVFPTVNVKKRSRVEGFSSDRSSVLLNDRSVSGPSMGKVGVQGHPVTGGFELDQQKSEERTKHLGPNKRPRTSMVDLKMDVRTNSLVRPPGTVDRDKEKLRIANNGVVQSEERSLPIVGDGWETSKMKKKKRSCIKLDVSPSTALNKPVNGFQETKQGMQQRLATDSRSKLSNDSNSFRLGVSNGTVAAGKSDGISQQTGLGIRTPIQRNGQDNNSLVSDKRGRSVSSEKERVTFRAVNKATVRDEFNSSSPTSSTKMNTAIRAPRSSSGVAPKMSPVVHRTAVPNDWELSHCATKPPAGVSSTNNRKRAAAARSSSPPVVPWQRPQKSSRTARRTSFVPVVSSNDEAPALDAVSDVAGNDIGIGFVRRSACSSPQQIKLKGEPSPSAALSESEESGLAEVKPKEKGRKPEEIDLKAGQNVPKVSNLVTRKSKLVSGEELGDGVRRQGRTGRSFNATRSLTPMTSEKLGNIGTAKQLRSARLGCDKNESKVGRPPTRKLSDRKAYARQKPTAISAAADYFVGSEDGHGELLAAVKGVINSVYSFSSPFWKQMEPFFSLISEDDITYWKQKVTLESSTLMPTPVPSNIDGCETIVNRYGLVDCERNARSDVRRSAGTNTENLPLPKGGHNMVPLCQRLIAALISEEDRSVGNEDFKFDAYDTESEPDGELELSGLDCRSLTNFQFARHSAYNGYGVIGKPTHDETESDMIDIPNFGLNPSFGNSVNGFLHDKTLMSGLACSELQYNNLGINDKLLLELQSIGLDLEPVPEMVQEDDEAILEDITRLDELYQEQVSKKKNLLDGLLKSASAAKELQEKDFDQRALDQLVVTAYEKYTACRGSSASGGKNSSNNKMVKQAALAFVKWTLEQYHQFEDTGKSCFSEPLFKDMFLTASSQHSIVRQSDGLEADSRKPYTSSLPLKATTASMGSQQSPSQFYQNMDNLDLTSSDMLPALNHSSEQTTGKEDLWANRVKKRELFLDDVGGTQGNSSAPGIGSSLTSSAKGKRSDRDRDGKGHGREVLSRNGTTKAGRQASSSAKGERKAKTKPKQKATQHSVSVNGLLGKLSEQPKPALPSVSKPVEKPSNRNAKEKDEFLGGFDEPIDLSNLQLPGMDVLGDPGDLADQGQDLGSWLNIDDDVLQDHDDFMGLEIPMDDLSDLNMMV 1313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04507 1313 MobiDBLite consensus disorder prediction 1132 1238 - -
Tsu04g04507 1313 MobiDBLite consensus disorder prediction 200 223 - -
Tsu04g04507 1313 MobiDBLite consensus disorder prediction 1052 1087 - -
Tsu04g04507 1313 PANTHER OS05G0107300 PROTEIN 1 1313 - -
Tsu04g04507 1313 MobiDBLite consensus disorder prediction 1 25 - -
Tsu04g04507 1313 MobiDBLite consensus disorder prediction 356 374 - -
Tsu04g04507 1313 MobiDBLite consensus disorder prediction 472 490 - -
Tsu04g04507 1313 MobiDBLite consensus disorder prediction 1134 1153 - -
Tsu04g04507 1313 MobiDBLite consensus disorder prediction 1099 1116 - -
Tsu04g04507 1313 MobiDBLite consensus disorder prediction 528 561 - -
Tsu04g04507 1313 MobiDBLite consensus disorder prediction 446 490 - -
Tsu04g04507 1313 MobiDBLite consensus disorder prediction 356 385 - -
Tsu04g04507 1313 MobiDBLite consensus disorder prediction 1099 1119 - -
Tsu04g04507 1313 MobiDBLite consensus disorder prediction 1067 1087 - -
Tsu04g04507 1313 MobiDBLite consensus disorder prediction 99 121 - -
Tsu04g04507 1313 MobiDBLite consensus disorder prediction 449 464 - -
Tsu04g04507 1313 MobiDBLite consensus disorder prediction 1154 1172 - -
Tsu04g04507 1313 PANTHER PLANT/F27B13-30 PROTEIN 1 1313 - -
Tsu04g04507 1313 MobiDBLite consensus disorder prediction 398 428 - -
Tsu04g04507 1313 MobiDBLite consensus disorder prediction 398 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04507 Tsu-Chr4 52781529 52792635 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04507 - - aprc:113846392 1952.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04507 04 52781529 52792635 Tsu04g04507 04 52781529 52792635 ECH
Tsu04g04507 04 52781529 52792635 Tsu08g02591 08 38901138 38911931 PCT