Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04493 atggaaGGTGACACATACTCCACCCAAATTGATGGCAAGATCTTCCAAACATTTCAAAAAAGCTTTGTTCAAGTGCAAAACATTTTAGATCAGAATCGTGTACTCATCAATGAGATAAACCAGAATCATGAGTCTAAGGTCCCTGACAACCTCAACAGGAATGTTGGTCTTATTAAGGAGCTTAACAACAACATAAGAAGAGTTGCTCAACTTTATTCAGATCTTTCAACTTCTTTCACCAAATCTATTGATGTTTCTTCTGAAGGAGATTCAAGTGGTGCTGTTAAATCTCAAGAAAAATCCACTCACAAACGACACAGACCTGATctttaa 333 0.3574 MEGDTYSTQIDGKIFQTFQKSFVQVQNILDQNRVLINEINQNHESKVPDNLNRNVGLIKELNNNIRRVAQLYSDLSTSFTKSIDVSSEGDSSGAVKSQEKSTHKRHRPDL 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04493 110 PANTHER PROTEIN ELF4-LIKE 4 1 108 IPR040462 GO:0042753
Tsu04g04493 110 MobiDBLite consensus disorder prediction 83 110 - -
Tsu04g04493 110 Pfam Early Flowering 4 domain 9 90 IPR009741 -
Tsu04g04493 110 PANTHER PROTEIN ELF4-LIKE 3 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04493 Tsu-Chr4 52655387 52658475 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04493 - - ccaj:109808760 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04493 04 52655387 52658475 Tsu04g04493 04 52655387 52658475 ECH
Tsu04g04493 04 52655387 52658475 Tsu08g02251 08 31010891 31013478 PCT