Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04471 ATGGCGGACGAATTCTGTAGAGCCGTCGATGACGGAATTAAGCTCTCAAAGCGTATATACTTCGGTAAAGACAGAGCAGTTGCGCCGCCGAAGCTACCAACTTCAATGGAAAGGTCAACAAACGCACTTCTTCCTAAAGCACCAATGGTTTACGCAGTTATCTCCGATCCAGCGATCGTAGATAATCCTGATATTGCTAGCTATCAACCACATGTGTATGGAAGGTGCGATCCTCCAGCACTTATTCCGCTTCAGATGAACGCAATTGAAATGGAAATTGATTGTTATCTTGATACTGCTTTTGTAACTGTCTCCGGTACTTGGAGACTCCATTGCGTTACCGGTAGCAGCTCCTGTGATTGCCGTCTCGCCGTTCCAATCGGCCACGAGGGTTCAATTCTAGGTGTTGAGGTTAATGCACTTAGAAAATCTTATTCTACTCAACTGGTAGTTATGGATGAAAATCAAAGTGCTTCACCAGCTCCTCAAAATGGAGGATTtcttaaatcaaatatatttattttaactatACCAGAGATTGACGGGGGttcaaatttatcaattaaaattaattggTCTCAGAAAGTAGTATGCTCCAATGGCGAGTACTCTTTGAATGTGCCGTTTACTTTTCCTGAATTTATAAACCCTGCTGGGAAGAGAATGGCTAAAAGAGAAAAGATACGGCTGAatgttgatgttgttgctgGAAGTGAGCTTCTGTTCAAAACAACAAGCCATCCCCTACAGCAAGTGAGGCGTCAAGCTGGGAGTATGGGTTTCTTATGTGATAACGATGTTCTCTCATGGTCAAAAGATGATTTTAGCTTTTCTTATGCAGTTTCCTCAAGTCGTATAAATGGCGGCGTTCTCTTGGAATCTGCATCTCTGCATGATTTTGATCAAAGAGAGATGTTCTACATATATCTTTCTCCTGGAGATATTCAGCATAAGAAGGTATTCAAAAAGGAGATAATATTCATCATAGACATCAGTGGAAGCATGCAGGGAAAGCTAATGGATGACACAAAGAATGCATTACTGTCTGCTCTCTCTAAGCTTAatcctgatgatttgtttacaATTATAGCCTTTAATGGAGAGAGTcaactattttcaaaatcaatggaatTGGCTTCCAATGATGCTGTAGAAAGGGCCAGCGAGTGGATCAACACGAACTTTGTTGCTGGAGGCGGTACAAATATTTCGCATCCGTTAAATACGGCAATAGAAATGCTATCCGGTGCTCAAAGTTCAGTTCCAATAATTTTCCTAGTTACAGATGGAACTGTTGAAGATGAGAGACAAATTTGTGATACGGTAAAAAGTCATATGATCAATGGAAAGTCAATATGCCCTCGAATATACACTTTTGGTATAGGTTCATTCTGCAATCATTATTTCTTGCGGATGCTTGCTATGATTGGTAGGGGCCAATATGATGCTGCACTGGATGTGGATTTGATTGAGCCTCGAATGCTGTCATTGTTTGAAAAAGCTTCATCGCTCATTCTTGCAAATATCAAAATGGATATGTTGGATGAAATCGATCATGttgagGTATTCCCTTCCCATATCCCAGATCTTTCGTCAGAGGGTCCATTGGTCTTATCCGGAAGATACAAGGGAAATTTTCCTGAAACTCTAAAAGTCAAAGGCGTCTTGGCTGATTTCAGTAAGTTTGAAATAGATTTGAAGATACAAAAGGATAAGGGCATACCTGTACAAAGGGTTTCGGCAAGAGATCAAATACAACATCTTACTGCTCAAGCATGGCTTTCAGAAAATAAACAATTAGAACAAAAGGTCGCAAAACTGAGCTTGCAGACCGGCTTTACATCTGAGTATACATGTATGATTATGCTTGAGACTGATAATCTAAAGAAAATCAAGGAATCAGCTGGAGTGAAAGAAGTGTCAAAAAAGAAACTTTCTAAGCACGATGCAAATGTCCAAGGCCAGAGGACAATTCTACTCCCACACGTAGGTATTGGCTTTGGCGACTTGAGAGCAACAGCTGAAAATACTCCTCCAGGATATGAACCGAAGCCAGAATTGGCTGAAATCTTTAAAGCAGCCTCAAATTGCTGTGACACCGTGTGTGGTTACTGTTGCTGCATGTGCTGCATCCAATGCTTTTCCAGGATGAACAACCAATGTCTAACTGCATTGAACCAGCTTTGCATTGGTTTGGGATGCCTGGTCTGCCTCGAATGTTGTTCACATATATGTTGTTGTGGAGGCGACGACTGA 2256 0.3963 MADEFCRAVDDGIKLSKRIYFGKDRAVAPPKLPTSMERSTNALLPKAPMVYAVISDPAIVDNPDIASYQPHVYGRCDPPALIPLQMNAIEMEIDCYLDTAFVTVSGTWRLHCVTGSSSCDCRLAVPIGHEGSILGVEVNALRKSYSTQLVVMDENQSASPAPQNGGFLKSNIFILTIPEIDGGSNLSIKINWSQKVVCSNGEYSLNVPFTFPEFINPAGKRMAKREKIRLNVDVVAGSELLFKTTSHPLQQVRRQAGSMGFLCDNDVLSWSKDDFSFSYAVSSSRINGGVLLESASLHDFDQREMFYIYLSPGDIQHKKVFKKEIIFIIDISGSMQGKLMDDTKNALLSALSKLNPDDLFTIIAFNGESQLFSKSMELASNDAVERASEWINTNFVAGGGTNISHPLNTAIEMLSGAQSSVPIIFLVTDGTVEDERQICDTVKSHMINGKSICPRIYTFGIGSFCNHYFLRMLAMIGRGQYDAALDVDLIEPRMLSLFEKASSLILANIKMDMLDEIDHVEVFPSHIPDLSSEGPLVLSGRYKGNFPETLKVKGVLADFSKFEIDLKIQKDKGIPVQRVSARDQIQHLTAQAWLSENKQLEQKVAKLSLQTGFTSEYTCMIMLETDNLKKIKESAGVKEVSKKKLSKHDANVQGQRTILLPHVGIGFGDLRATAENTPPGYEPKPELAEIFKAASNCCDTVCGYCCCMCCIQCFSRMNNQCLTALNQLCIGLGCLVCLECCSHICCCGGDD 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04471 751 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 750 - -
Tsu04g04471 751 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 750 - -
Tsu04g04471 751 Coils Coil 590 610 - -
Tsu04g04471 751 CDD vWA_interalpha_trypsin_inhibitor 321 495 - -
Tsu04g04471 751 ProSiteProfiles VWFA domain profile. 324 517 IPR002035 -
Tsu04g04471 751 SMART VWA_4 322 502 IPR002035 -
Tsu04g04471 751 SUPERFAMILY vWA-like 323 487 IPR036465 -
Tsu04g04471 751 Gene3D von Willebrand factor, type A domain 322 500 IPR036465 -
Tsu04g04471 751 Pfam von Willebrand factor type A domain 323 481 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04471 Tsu-Chr4 52479442 52486338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04471 - - gmx:100777542 1174.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04471 04 52479442 52486338 Tsu04g04471 04 52479442 52486338 ECH
Tsu04g04471 04 52479442 52486338 Tsu08g02322 08 33063756 33070344 PCT