Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu04g04464 | ATGTTGAGGAAACGACCCTCTCCAATGATCGGAAAGTTGTCAGAGATACTGGTCTCCGGTGGCCGTATGATGGACACCGGAAGCCCAAGAGGCCCATTAGACACAAAGATGCAATCATCACCAAGAGGTTTAAAAAACTATGACCTTGGCAGTGTTGGTCTCAAAATTGTGgcagctcttgataccaataaACCATGTGAAGTTTTACCTAAACATGCTGTTTGTACATCAAATTTGAATCGATCAAGACCAATCCAAATTCAATCTGTTAAAAGCCCAAATGGGTTTCAAATGGATTATTCAAATATGAATGAAATTGATATGGAAAGCTTGGAAGAAGAATACACCTATGTGACATGCCACGTACCTAATAAAACCTTCACTAAGGTTTATTATGATGGTGGTGAAGGTGATGTTCGGAGACAACAAGGTTGTAATTAtaacatcaacaacaataacaacaacgtTGGTGTTCTAAGAAGATCTTCACCACCACAAATTTTGATTGAGCCGGAACCATTATTTCCTACATCAAATTTTCTTAATTCATGTAACTTATGCGGAAAGAATTTGCATGGCAAAGATATATACATGTACAGAGGAGAGAAAGCATTTTGTAGCACAGAGTGTCGTTCAAGTCAAATAATGATGGATGAACGCAAAGAGAGATGTGGGTCAGAAGCAACAAGGTCTGTGGAATTGTCAAGTTCACCTTATACAAGGGATCAAATATTTTCGAATGGAATTCTTGCAATTTAA | 759 | 0.3584 | MLRKRPSPMIGKLSEILVSGGRMMDTGSPRGPLDTKMQSSPRGLKNYDLGSVGLKIVAALDTNKPCEVLPKHAVCTSNLNRSRPIQIQSVKSPNGFQMDYSNMNEIDMESLEEEYTYVTCHVPNKTFTKVYYDGGEGDVRRQQGCNYNINNNNNNVGVLRRSSPPQILIEPEPLFPTSNFLNSCNLCGKNLHGKDIYMYRGEKAFCSTECRSSQIMMDERKERCGSEATRSVELSSSPYTRDQIFSNGILAI | 252 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu04g04464 | 252 | Pfam | zinc-finger of the FCS-type, C2-C2 | 175 | 221 | IPR007650 | - | |
| Tsu04g04464 | 252 | PANTHER | DUF581 FAMILY PROTEIN | 1 | 252 | - | - | |
| Tsu04g04464 | 252 | ProSiteProfiles | Zinc finger FLZ-type profile. | 179 | 222 | IPR007650 | - | |
| Tsu04g04464 | 252 | MobiDBLite | consensus disorder prediction | 21 | 40 | - | - | |
| Tsu04g04464 | 252 | PANTHER | OS02G0174800 PROTEIN | 1 | 252 | IPR044604 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu04g04464 | Tsu-Chr4 | 52440675 | 52442166 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu04g04464 | - | - | gmx:100816402 | 334.724 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Tsu04g04464 | 04 | 52440675 | 52442166 | Tsu04g04464 | 04 | 52440675 | 52442166 | ECH | |
| Tsu04g04464 | 04 | 52440675 | 52442166 | Tsu08g02334 | 08 | 33445513 | 33447125 | PCT |