Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04431 ATGTTTAGATTAAAGAATAGTGAAAACCTTGCAAGGTTCTTGTATCAGAAAATTCTGCATAATAGTAATTCTATGGCTTATTCAATAGGCTATATTGATCCTTGTTCCCATTTGAGCAAGGTTTATGCCAATACTTTTGGTTTTGGGGTTAGTAGAAGAATTCAATTTGGTAGAAAAAGTTGTGGCTTTTATACCAGTTGTAGtaataatagtaaattttttgtgAGGGCTAATGCGAGGCTTCGCGGCTTTGCATCTGATTTGGAACAAGGGAATTCTGTTGGGGGTGATGCTAATGTTATTAAGGTTGATAATGGTGGAGTAAATGGAAGTCCTGCTACGCCTCGTTGTTTCCGAGATCAACGTATGTCTGAGAAacttgttgttgctgttgatgtGGATGAGGTATTAGGAAACTTCGTATCGGCTCTCAACAAGTATATTGCAGATCAATATTCATCAAATTATTCAGTTTCTGAATATCATGTGTACGAGTTCTTTAAGATATGGAACTGTTCGCGTGATGAAGCTGATATTCGCGTTCATGAGTTTTTTAAGACGCCATATTTCAAGTCAGGGATTCACCCTCTCCCAGGTGCTCAGACGGCAATGCAAAAGTTATCAAGATTTTTTAACCTATCAGTTGTAACGTCTAGGCAGAATGTAATTAAGGATCACACAATTGAATGGATAGAGAAGCATTTCCCAGGACTGTTTCATGAGATTCACTTTGGTAACCACTTTGCACTTGATGGGAAATCAAGACCAAAATCAGAGATTTGTAGGTGCGCGCCTTGA 798 0.3672 MFRLKNSENLARFLYQKILHNSNSMAYSIGYIDPCSHLSKVYANTFGFGVSRRIQFGRKSCGFYTSCSNNSKFFVRANARLRGFASDLEQGNSVGGDANVIKVDNGGVNGSPATPRCFRDQRMSEKLVVAVDVDEVLGNFVSALNKYIADQYSSNYSVSEYHVYEFFKIWNCSRDEADIRVHEFFKTPYFKSGIHPLPGAQTAMQKLSRFFNLSVVTSRQNVIKDHTIEWIEKHFPGLFHEIHFGNHFALDGKSRPKSEICRCAP 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04431 265 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 127 238 IPR010708 GO:0008253|GO:0009264
Tsu04g04431 265 SUPERFAMILY HAD-like 128 260 IPR036412 -
Tsu04g04431 265 Gene3D - 150 261 IPR023214 -
Tsu04g04431 265 PANTHER NUCLEOTIDASE YQFW-RELATED 46 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04431 Tsu-Chr4 52086956 52090290 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04431 - - gmx:100783615 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04431 04 52086956 52090290 Tsu04g04431 04 52086956 52090290 ECH
Tsu04g04431 04 52086956 52090290 Tsu08g02444 08 36341352 36344998 PCT