Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04371 ATGGCGGAGGTTACTCTCATCGCTCACTTTCTCAACCAAACACTCAGCCCAGACGCCACCGCCGTCCGTTCTGCCACCGATGAGCTCGATCGTCTTTCTCTCACTCCTCACTTCCCTTTCCATCTCCTCTTCATTTCCACTGGAGGAGAAAATCAAGGTCAGAAAATTGCTGCTGCTACATATCTGAAAAACCACACGCGCCGGAATGTTGATAGCAGCGGCGCTACACCTTCCAATGTGAGCAAGGAGTTCAAGGATCAGCTGATGCAAGCTTTGCTTCAAGTTGAATTTCCCATCCTCAAGATTTTAGTTGAAGTGTTCCGAATTGTTGCTGCTGCGGATTTTGTGAGACAGAGTTTGTGGCCGGAACTTGTGCCAAATCTGCAGTCTGCTATCCAAAATAGCCATCTTATCAACGGTTCAAACTCCACATGGAATACCATCAATGCACTTGTGGTTCTTCATGCGCTTCTCAGACCCTTTCAGTATTTTTTGAATCCCAAAGTTGCCAAGGAGCCAGTACCGCCGCAGTTGGAGCTCATAGCAAAAGAAATTCTTGTGCCTTTGCTCACTGTTTTTCATCAGTTTGTTGGAAAgGCCGTAGCAAACCATGACAGTGCAGACATACAAACTGAGAAAGCCATCCTCACTATATGCAAATGCCTGCATTTTGCTGTAAAGTCCTACATGCCATCTACTCTAGTTCCTCTACTGACTTCGCTTAGTCGGGACCTAATGAGCATTTTGAGTTCTCTGAGCTTTGATTCTACAGTCACTCAAGAAGATGTATATTTGACAAGATGGAAGTCTGGAAAAAGAAGTCTGCTAATTTTCTCTTCCCTCGTTACCCGGCACAGGAAACATTCTGACAAGTTGATGCCAGATATTATCAATTGTGCTCTAAACATAGTCAAATTTAGCAAAAATACCAGTAGACTTCCTTTCCTTTTAGAGAGGATTCTCTCCCTAGGTTTTGATGTAATTTCAAATGTGCTGGAGACTGGCCCTGGGTGGCGGTTAGTTTCTCCACATTTTACAGCTTTATTGGAATCTGCAATCTTCCCAGCATTGGTAATGAATGAAAAGGACATGTCAGAGTGGGAAGAAGATGCTGATGAGTATATACGGAAGAATCTTCCTTCAGATATAGACGAAGTTAGTGGATGGAGGGAGGATTTATTCACTGCCAGAAAAAGTGCTGTAAACTTACTCGGTGTTATTTCAATGTCAAAGGGGCCACCAATGGAGACTTCCATTGACAGTTTATCAGCCAAGCGTAAAAAAGGtcaaaagaacaaaagaagCAATCAACGCCGTTCTATGGGGGAGTTATTGGTGCTTCCGTTTTTGTCTAAGTTTCCCATTCCTTCTGTTTCCAACGTGTCTCAAAAAAAAGTCCTGAATGATTACTTTGGTGTACTGATGGCATATGGCGGTCTGCAAGATTTTTTGAGAGATCAAGAATCTGGATTTGTGACAATTCTCGTTCGTACACGGATTCTGCCACTGTATGCCATAGCTGTTTCTGTACCACACCTCATTGCAAGTGCAAACTGGGTACTTGGAGAACTAGGCTCCTGTCTACCAGAGGAGATGAGTGCTGATGTATATTCTCAACTGCTTATGGCATTGGTTATGCCGGACAAGCAGGATATTTCTTGCTATCCTGTGCGGGTTTCTGCTGCTGGGGCAATAACTACACTACTTGATAATGACTATATGCCCCCTGATTTTCTGCCCCTTCTCCAAGTAATAGTTAGCAACATTGGAAATGATGAGAATGATAGCTCCATCTTATTTCAACTTCTCAGTTCTATCATGGAAACTGGAGAGGAGAAAGTTTCAGTCCATATCCCACACATCATCCCATCTCTAGTGGGTTCAGTGTCAAAATGGTTAACTTCCAATCTGGAGCCTTGGCCTCAAGTGGTTGAGCATGGAATCTCTGCTCTGGCAGTTATGGGTCAGACATGGGAAGACTCTAGGCCTGAAGTATCTAATTCtgaatcaaatgattttcaagaaaaatgggCTGCGGATCAGGCAGCAATTGGCAGAGCTTTTGCTGCACTGTTGCAGCAGATTTGGCTTACACCTTTATCCACACAGGATCAACAAGACCAAAATTTTCCAACTTCATCATGCATTGAAGATTTGTCAACTTTGCTACGATCTGTCATGTTGTCTATTGATGGAAATCAGTTGATTCAAGAGTTTAAAGTGCCAGAGCTGCTTTCAGTTTGGGCTGACATGATTGCAGAGTGGCATGCATGGGAAGAATCAGAAGATTTGTCAATTTTTGATGTGATTAAGGAAATTGTGAATTTAGATCGTTCATTCAGGTTGAAAAACTTTCTTGTAAAAGAAGTTCCACCCCCTCCAGCTCCACCTGTGCCTGAACGTTCAATTGTAGAAGGAATTGCCACTTTTGTTAGTGAGGCCATTAAGCAATATCCTTCTGCCACATATAGAGCTTGCTCCTGTGTCCATACGTTACTGCATTGTCCAACCTACTCAATTGAAACTGAAGGTGTAAAGCAGTCATTGGTTATTGTTTTTAGTCGAGCAGCCTTCTCTCGCTTTGTTGAAGTTCGAAGCACACCCAATTCACTTTGGAAGCCTCTATTGCTTGCTATATCTTCATGCTACTTGTGTTATCCTGAAATTGTAGAAGGTATTATGGAAAAAACTGAACAGGGAGGTGTCACAATGTGGGCATCTGCATTGTGTCATGTATCCAGTAGCTCCTTTGAGGCTGCCGGTCTGACAACAGAGTCCGAGACAAAGTTAATTGTGATGACACTGGCGCAATTGATTGAGCAACTTCTGAAACAAGGGAAGTCGTgtggtaattcaattcaaaactGCTTTACTTCACTAATGGAGGTATCCGTTCAGTTGAAAGAATTACAAGATGAGaaaggagatgaagaagaagctgaAGAGGCAGAAGATGACGAGGATGAGGatagtgaggatgatgactccGAAGATTACGATGAGGACTCTGAGgttgaagaatatgaagaaaCGGAAGAAGAATTTCTTGATAGGTATGCTAAAGCTGCTGGGGCATTGGAAGATGGTTCAGCTATTATTGAAGAGGGGGATGTTGAAGATCAAGAACTGGATATGGAATTAGGTCAATTACTTGACGTTGATGAGCAAAAAGTTGTATTGTCCTTGATAGAGAAATACCATCATGTGCTTATACAAGGACAAGGTTTGCCCTCGCAGCTCATCACGAGTTTTTTGAATGCCTTCCCCAGCTGTGGTTTGTATTTCCAGCAATATTGA 3297 0.4143 MAEVTLIAHFLNQTLSPDATAVRSATDELDRLSLTPHFPFHLLFISTGGENQGQKIAAATYLKNHTRRNVDSSGATPSNVSKEFKDQLMQALLQVEFPILKILVEVFRIVAAADFVRQSLWPELVPNLQSAIQNSHLINGSNSTWNTINALVVLHALLRPFQYFLNPKVAKEPVPPQLELIAKEILVPLLTVFHQFVGKAVANHDSADIQTEKAILTICKCLHFAVKSYMPSTLVPLLTSLSRDLMSILSSLSFDSTVTQEDVYLTRWKSGKRSLLIFSSLVTRHRKHSDKLMPDIINCALNIVKFSKNTSRLPFLLERILSLGFDVISNVLETGPGWRLVSPHFTALLESAIFPALVMNEKDMSEWEEDADEYIRKNLPSDIDEVSGWREDLFTARKSAVNLLGVISMSKGPPMETSIDSLSAKRKKGQKNKRSNQRRSMGELLVLPFLSKFPIPSVSNVSQKKVLNDYFGVLMAYGGLQDFLRDQESGFVTILVRTRILPLYAIAVSVPHLIASANWVLGELGSCLPEEMSADVYSQLLMALVMPDKQDISCYPVRVSAAGAITTLLDNDYMPPDFLPLLQVIVSNIGNDENDSSILFQLLSSIMETGEEKVSVHIPHIIPSLVGSVSKWLTSNLEPWPQVVEHGISALAVMGQTWEDSRPEVSNSESNDFQEKWAADQAAIGRAFAALLQQIWLTPLSTQDQQDQNFPTSSCIEDLSTLLRSVMLSIDGNQLIQEFKVPELLSVWADMIAEWHAWEESEDLSIFDVIKEIVNLDRSFRLKNFLVKEVPPPPAPPVPERSIVEGIATFVSEAIKQYPSATYRACSCVHTLLHCPTYSIETEGVKQSLVIVFSRAAFSRFVEVRSTPNSLWKPLLLAISSCYLCYPEIVEGIMEKTEQGGVTMWASALCHVSSSSFEAAGLTTESETKLIVMTLAQLIEQLLKQGKSCGNSIQNCFTSLMEVSVQLKELQDEKGDEEEAEEAEDDEDEDSEDDDSEDYDEDSEVEEYEETEEEFLDRYAKAAGALEDGSAIIEEGDVEDQELDMELGQLLDVDEQKVVLSLIEKYHHVLIQGQGLPSQLITSFLNAFPSCGLYFQQY 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04371 1098 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 5 1097 - -
Tsu04g04371 1098 Gene3D - 1 1028 IPR011989 -
Tsu04g04371 1098 PANTHER IMPORTIN-7, 8, 11 5 1097 - -
Tsu04g04371 1098 Pfam Importin-beta N-terminal domain 25 94 IPR001494 GO:0006886|GO:0031267
Tsu04g04371 1098 MobiDBLite consensus disorder prediction 968 1012 - -
Tsu04g04371 1098 Coils Coil 960 987 - -
Tsu04g04371 1098 SUPERFAMILY ARM repeat 1 1017 IPR016024 -
Tsu04g04371 1098 MobiDBLite consensus disorder prediction 415 437 - -
Tsu04g04371 1098 MobiDBLite consensus disorder prediction 974 1012 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04371 - - aprc:113846276 1698.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04371 04 51632406 51640652 Tsu04g04371 04 51632406 51640652 ECH