Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04360 ATGACTACTGGTAGAATCCTAACTAAAACCCCATTGATTTCTGGGTTTTCTCCAATTAATAAGTTTAGTGATTCAACAATGATGAGTATATTGTCTAGATCAAGCTATAGATATTATAGATGTAATACTAAGATTGtaggttatatacacgtgactagtttgaatttgaatcggCGAGATTTTAGTGTTCCCGATTGGAATTGGGTTCAATCTAGGAATTTTAGCAATAGTTTTTGTGTTAATATTGGTAGGGTTAGGCCTAGGGTTGTATCATTGATACCGAATGTAGCTTCGGATTTTAGAAACCAGTCTACATCGGTTGATTCTAATGTTAATGACAAAAGCTTTGagaatatttttattcaaagCAGTTTGAATCCAAAGCCTTTGGTGTTTGATAGAATTGATACTGATGATCAAAGTAAGTTGGAGGAAGTTGATGGATCGACTGTAAATTTAGATAATAAGCTGAATGATTTGAATGAGAATAAAGATGAGAGGGAGCTTTCTGAGATTGAAAAGGAAGCTTGGAAGTTGCTTCGAGGGGCTGTTGTTACTTACTGTGGGAATCCAGTTGGGACTGTTGCGGCTAATGATCCTGCTGATAAACAACCTCTGAATTATGATCAAGTCTTTATCCGTGATTTTGTTCCATCCGCACTTGCCTTTCTGCTCAATGGTGAAGGGgaaattgtcaagaattttCTACTCCACACATTGCAATTGCAGAGTTGGGAGAAGACCGTTGACTGCTACAGCCCAGGGCAAGGGTTGATGCCAGCGAGCTTCAAAGTTAAAACTATCCCTCTTGATGGAAGCAATGAAGCATTTGAGGATGTTTCGGATCCTGATTTTGGTGAATCAGCTATAGGCCGTGTTGCCCCTGTTGATTCAGGATTGTGGTGGATTATATTGTTGAGAGCATATGGGAAGTTAACGGGTGACTATTCATTGCAAGAGAGAGTGGATGTCCAGACAGGAATAAGACTGATCCTTAAGTTGTGTCTAACTGATGGATTTGACATGTTTCCTTCTCTACTAGTCACTGATGGTTCCTGCATGATTGATAGAAGGATGGGAATTCACGGTCACCCTCTTGAGATCCAGGCATTATTTTACTCAGCTTTACGCTGTTCTCGTGAGATGCTGATAGTGAATGATACAACTAGTAGTCTGGTGGCTGCCGTTACTAATCGTTTGAGTGCACTCTCCTTTCACATGAGAGAGTACTATTGGGTTAACATGAAGAAGATTAATGAAATATATCGCTACAAAACGGAAGAGTATTCTACTGATGCTGTCAACAAGTTTAACATCTATCCAGAGCAAATTCCTTCATGGCTCGTGGACTGGATATCTGAGGAAGGTGGATATTTCATCGGCAATCTGCAACCTGCTCACATGGACTTTAGGTTTTTCACACTTGGAAATCTTTGGGCTATTGTTTCTTCTTTAGGCTCAGAAAGACAGAATGAGGGCATTTTGAATTTAATAGAGGCCAAATGGGATGATATCATTGGTCAAATGCCTCTCAAGATATGCTATCCAGCATTGGAGGGCGAGGAATGGCGTATAATCACCGGTTGTGACCCCAAGAACACCCCTTGGTCATATCACAATGGTGGATCTTGGCCGACGCTTCTCTGGCAGTTCACTCTAGCATGCATCAAGATGGGTAGGTCAGATTTAGCACAGAAGGCAGTTAATTTAGCAGAGAAAAGGCTTTGTGAAGATAGATGGCCAGAATATTATGATACTAGAAATGGAAAGTTTATTGGGAAGCAATCGAGGTTGATGCAGACATGGACTATAGCTGGTTTCCTTACTTCAAAGATGCTTCTAAAGAATCCAGAGAAAGCATCTTTATTGTTTTGGGAAGAGGATTTTGAAATTCTTCAGAATTGTGTCTGCATGCTTAACAAAACTGGTAGAAGGAAGTGTTCACGTTTTGCAGCAAGATCAAAGATTCTTATTTAA 1977 0.3885 MTTGRILTKTPLISGFSPINKFSDSTMMSILSRSSYRYYRCNTKIVGYIHVTSLNLNRRDFSVPDWNWVQSRNFSNSFCVNIGRVRPRVVSLIPNVASDFRNQSTSVDSNVNDKSFENIFIQSSLNPKPLVFDRIDTDDQSKLEEVDGSTVNLDNKLNDLNENKDERELSEIEKEAWKLLRGAVVTYCGNPVGTVAANDPADKQPLNYDQVFIRDFVPSALAFLLNGEGEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVKTIPLDGSNEAFEDVSDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYSLQERVDVQTGIRLILKLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREMLIVNDTTSSLVAAVTNRLSALSFHMREYYWVNMKKINEIYRYKTEEYSTDAVNKFNIYPEQIPSWLVDWISEEGGYFIGNLQPAHMDFRFFTLGNLWAIVSSLGSERQNEGILNLIEAKWDDIIGQMPLKICYPALEGEEWRIITGCDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRSDLAQKAVNLAEKRLCEDRWPEYYDTRNGKFIGKQSRLMQTWTIAGFLTSKMLLKNPEKASLLFWEEDFEILQNCVCMLNKTGRRKCSRFAARSKILI 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04360 658 SUPERFAMILY Six-hairpin glycosidases 176 609 IPR008928 GO:0005975
Tsu04g04360 658 PANTHER - 18 657 IPR024746 GO:0033926
Tsu04g04360 658 Gene3D - 206 606 IPR012341 GO:0005975
Tsu04g04360 658 PANTHER ALKALINE/NEUTRAL INVERTASE C, MITOCHONDRIAL 18 657 - -
Tsu04g04360 658 Pfam Alkaline and neutral invertase 176 617 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04360 Tsu-Chr4 51512696 51518740 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04360 - - gmx:100791877 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04360 04 51512696 51518740 Tsu04g04360 04 51512696 51518740 ECH