Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04359 atggtgTTGTCATCACTAAAACCAATTAGGAATGAAACAATTTTACCAAGTGATGTTATTCCTATAGTGGACCTTAAGGGTGAAAGGTGTGAAgtaataaaacaaattgtgaAAGCAAGTGAAGAATATGGTTTTTTCAAGGTGATAAACCATGGTATTAGTGATGAAACTATTGATAAAATGGAAGAAGCAGGATTTAATTTCTTTGCAAAACCAATGAGTCAAAAGAAACAAGCTGCACCTGCTTATGGTAGTAAGAACATAGGATTTAATGGTGACATTGGTGAGGTTGAGTACCTTCTTCTCAATGCTAATACTTCCTCTATTGATCAAATATCCAAAACTATATCCAATGATGATCCTAACTTCAGgtATAGAGTGAGTTCATATACAGAAGCAGTGAAAGAGGTTGCATGTGAGATATTAGAGTTAATGGCAGAGGGTTTGGGGGTCCCTGATACAAAGGTATTCAGCAGTTTAATAAAGGATATTGAAAGTGACTCAGTTCTTAGGCTCAATCACTACCCTCCTAAGGACAAGTCACATTCCAACAATGTTGGCTTTGGGGAGCATTCTGACCCTCAGATTTTGACCATTCTTAGATCTAATGACGTTTCTGGTCTTCAAATCTCTCTTCAACATGGTCTCTGGATTCCTGTTAACCCTGACCCCTCTGCTCTCTGTGTTAATGTAGGTGATGTCCTTGAGGTTATGACAAATGGAAGATTTGTAAGCGTGAGACATAGGGCAGTGACAAACTCATACAAAACTAGAATGTCAATGGCATATTTTGGGGCTCCACCTCTAAATGCTTCCATTGTTGCTCCACCAGTTTTGGTTACACCTCACAGGCCCTCTCTCTTCAGAACATTTACTTGGGCCGATTACAAAAAAGCTACTTACTCTCTAAGACTTGGTGATACTAGAATTCAACTTTTTAGAGCAAACATGTCATGA 957 0.3762 MVLSSLKPIRNETILPSDVIPIVDLKGERCEVIKQIVKASEEYGFFKVINHGISDETIDKMEEAGFNFFAKPMSQKKQAAPAYGSKNIGFNGDIGEVEYLLLNANTSSIDQISKTISNDDPNFRYRVSSYTEAVKEVACEILELMAEGLGVPDTKVFSSLIKDIESDSVLRLNHYPPKDKSHSNNVGFGEHSDPQILTILRSNDVSGLQISLQHGLWIPVNPDPSALCVNVGDVLEVMTNGRFVSVRHRAVTNSYKTRMSMAYFGAPPLNASIVAPPVLVTPHRPSLFRTFTWADYKKATYSLRLGDTRIQLFRANMS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04359 318 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 315 - -
Tsu04g04359 318 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 267 IPR005123 -
Tsu04g04359 318 Pfam non-haem dioxygenase in morphine synthesis N-terminal 20 82 IPR026992 -
Tsu04g04359 318 Pfam 2OG-Fe(II) oxygenase superfamily 167 265 IPR044861 -
Tsu04g04359 318 Gene3D - 4 304 IPR027443 -
Tsu04g04359 318 PANTHER PLANT GIBBERELLIN 2-OXIDASE 4 315 - -
Tsu04g04359 318 SUPERFAMILY Clavaminate synthase-like 15 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04359 Tsu-Chr4 51506984 51512072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04359 20 314 Glycosyltransferase AT5G59530 27.937 1.19e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04359 K04125 - gmx:100783917 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04359 04 51506984 51512072 Tsu04g04359 04 51506984 51512072 ECH