Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04355 ATGAATATTGTCAGTCCTGTTACTCCCGGTCAGGTCTCGTTCTTGCTCGGGATCATTCCGGTAATTATAGCATGGATATATTCCGAGATGTTGGAGTATCGGAAAAATTCTTTAATTTCCAAATCTAGGCACTCGGACATAAGCTTGGTTGAAGTGGGCAGTGGTGCTGTTATtaaagatgaagaggaagcaGTTTTATTGGAGGGAGGAGGTAAACAGCCAGCGTCCCCAACTCCAAAAACTCGAAGCTCAACTGCCTCACCATCAATTATCCGATTCCTCTTGTTGGATGAACATTTCCTTATTGAAAACCGTTTGACACTTAGAGCCATGTCTGAATTCGGTCTTCTTTTGGCTTACTACTATTTGTGTGATCGCACGGATTTCTTTGGCTCATCAAAAAAGAGTTACAATAGGGATCTATTCATCTTCCTCTATTTTCTCCTCATCATAGTTTCAGCAATAACTTCATTTACAATACATCATGACAAGTCACCATTTTCTGGGAAATCCATACTTTACTTAAATAGGCATCAGACTGAAGAATGGAAAGGCTGGATGCAGGTATTGTTTTTGATGTACCATTACTTTGCTGCATCTGAAATCTACAATGCAATCCGTCTGTTCATTGCTGCATATGTTTGGATGACTGGATTTGGAAActtctcatattattatattcgTAAAGATTTTAGCATGGCAAGATTTGCTCAGATGATGTGGCGGCTTAATTTCTTGGTATTGTTCTGTTGTGTTGTACTTAACAACAGTTACATGTTATACTACATCTGCCCCATGCACACTCTTTTCACTCTTATGGTTTATGGGGCACTCGGTATTTTCCACAAGTACAATGAGATTGGGTCAGTCATTGCTGCAAAAATTATTGCTTGCTTCTTGATTGTTATCTTCGTATGGGAGATACCTGGAGTATTTGAATGGGTTTGGAGTCCATTTACTTTCCTGCTAGGTTATACTGATCCTGATCCATCTAAATCACATTTTACCCGCTTGCATGAGTGGCATTTTCGCTCAGGGCTTGATCGATATATATGGATAATTGGAATGATATATGCTTATTATCATCCAACTGTTGAACGATGGATGGAAAAATTGGAGGAAACAGAAATCAAACGCAGAATATCAATCAAAGCTTCTGTTGTGCTAATATCTTCAGTGACGGGTTATTTATGGTTTGAGCATATATACAAGCTGGACAAAGTTACTTACAACAAATACCATCCCTATACCTCGTGGATTCCCATAACgGTTTACATATGCTTGCGCAATATTACACAAAGTTTTCGTAGCTATTCGCTGACCCTTTTTGCGTGGCTTGGGAAGGTTACCCTGGAGACTTACATATCCCAGATTCatatttggttaagGTCAGGCATTCCAGATGGTCAACCCAAATTGTTGCTTTCCCTGATCCCAGACTACCCAATGTTGAACTTCATGCTCACTACTTCCATATATGTTGCAATTTCCTATAGGCTCTTTCAGCTGACCAATACACTGAAAAATGCATTTGTGCCTGGCAAAGATGACAAGCGTCTGATACACAACATAATTACCGGGACAACAATCTCAGTTGTTTTATATACGTTATCCTTTGTCTTCCTTATGATACCCGAAGTCTTGGTTTGA 1650 0.3842 MNIVSPVTPGQVSFLLGIIPVIIAWIYSEMLEYRKNSLISKSRHSDISLVEVGSGAVIKDEEEAVLLEGGGKQPASPTPKTRSSTASPSIIRFLLLDEHFLIENRLTLRAMSEFGLLLAYYYLCDRTDFFGSSKKSYNRDLFIFLYFLLIIVSAITSFTIHHDKSPFSGKSILYLNRHQTEEWKGWMQVLFLMYHYFAASEIYNAIRLFIAAYVWMTGFGNFSYYYIRKDFSMARFAQMMWRLNFLVLFCCVVLNNSYMLYYICPMHTLFTLMVYGALGIFHKYNEIGSVIAAKIIACFLIVIFVWEIPGVFEWVWSPFTFLLGYTDPDPSKSHFTRLHEWHFRSGLDRYIWIIGMIYAYYHPTVERWMEKLEETEIKRRISIKASVVLISSVTGYLWFEHIYKLDKVTYNKYHPYTSWIPITVYICLRNITQSFRSYSLTLFAWLGKVTLETYISQIHIWLRSGIPDGQPKLLLSLIPDYPMLNFMLTTSIYVAISYRLFQLTNTLKNAFVPGKDDKRLIHNIITGTTISVVLYTLSFVFLMIPEVLV 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04355 549 Pfam 10 TM Acyl Transferase domain found in Cas1p 107 522 IPR012419 -
Tsu04g04355 549 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 7 545 - -
Tsu04g04355 549 PANTHER PROTEIN REDUCED WALL ACETYLATION 2 7 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04355 Tsu-Chr4 51461815 51468897 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04355 K03377 - gmx:100794337 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04355 04 51461815 51468897 Tsu04g04355 04 51461815 51468897 ECH