Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04325 ATGGGGAACAATTTGAAAAGGGTTACTATTGTTGATATTCAGCTTCTAGTTTTCATAGTCTTGGTCTTGTTTGGAATTTCAACTTCAGACAATCTACCAGCAAATTTTGTATTTGGAGATTCTCTTGTTGATGTAGGAAACAACAattatattctttctctctcaaaggCTAATTTTTTACCTAATGGTATTGATTTTGGAAGACCAACAGGAAGATTCACCAATGGAAGAACCATAGTTGACATCATTGGTCAGGAATTGGGTTTTGGCTTCACCCCGCCTTATTTGGCACCTACAACAACTGGACCAGTGATTTTGAAGGGCGTCAATTATGCCTCTGGTGGGGGTGGAATTCTCAATTCCACTGGACAAGTCTTTGGTGGTCGACTCAACATGGATGCCCAGATAGATAATTTTGCGAATACCAGACATGACATAATCTCCTACATTGGTGTTCCTGCGGCTCTCGATCTGATCCAGAAGGCATTGTTTTCAGTCACAATTGGTTCAAATGATTTCATTAATAACTATTTAACACCAGAAGTCACATTTTCTGAGGACAAATTGGATTCTCCGGAACTCTTTGTGGCCACCATGATATCAAAACTTAGAACACAACTCACTAGATTATTTAATTTGGGTGCTAGAAAAATTGTTGTAGCAAATGTGGGGCCAATTGGATGCATACCAAATCAGAGGGATTCACATCCAATTGAAGGAGATAATTGTGTCACTTTTCCTAATCAGCTAGCTTATTTATTTAACACACAATTAAAGGGTCTAATTGCAGAGCTTAGCTCAAATTTGGTTGGTTCAATATTTGTATATGCAGACATCTACCATATTTTAGAAGACGTACTCTCAAATTATGCATCATTTGGTTTTGATGATCCTTCTTCTGCTTGTTGCAACATGGCTGGGAGATTTGGAGGTTTGATCCCATGTGGTCCTACCTCAAAAGTTTGTTGGGATAGATCAAAATATGTGTTTTGGGACCCTTACCATCCTTCCGATGCTGCAAATGTTGTCATCGCCAAGCGCCTCCTAGACGGTGGTTTAACTGATATGTCGCCGATGAACATTCGCCAACTCTTTCAATCTTAA 1104 0.385 MGNNLKRVTIVDIQLLVFIVLVLFGISTSDNLPANFVFGDSLVDVGNNNYILSLSKANFLPNGIDFGRPTGRFTNGRTIVDIIGQELGFGFTPPYLAPTTTGPVILKGVNYASGGGGILNSTGQVFGGRLNMDAQIDNFANTRHDIISYIGVPAALDLIQKALFSVTIGSNDFINNYLTPEVTFSEDKLDSPELFVATMISKLRTQLTRLFNLGARKIVVANVGPIGCIPNQRDSHPIEGDNCVTFPNQLAYLFNTQLKGLIAELSSNLVGSIFVYADIYHILEDVLSNYASFGFDDPSSACCNMAGRFGGLIPCGPTSKVCWDRSKYVFWDPYHPSDAANVVIAKRLLDGGLTDMSPMNIRQLFQS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04325 367 Pfam GDSL-like Lipase/Acylhydrolase 36 347 IPR001087 GO:0016788
Tsu04g04325 367 SUPERFAMILY SGNH hydrolase 110 350 - -
Tsu04g04325 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 20 366 - -
Tsu04g04325 367 Gene3D SGNH hydrolase 25 351 IPR036514 -
Tsu04g04325 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 20 366 - -
Tsu04g04325 367 CDD SGNH_plant_lipase_like 33 351 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04325 Tsu-Chr4 51222646 51224245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04325 32 367 Acyl Lipid Metabolism Gene Families AT4G10950 35.398 6.55e-71 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04325 - - gmx:100791871 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04325 04 51222646 51224245 Tsu04g04325 04 51222646 51224245 ECH