Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04321 ATGACCATCACTAACTACACTCCTCTGTTCTTCCTCTGCTTCATAATCTCCCATGTACTTAGCAATGTTGAAATACATCAAGACCCTTCAACCCAAACTCTACAGTCATTCCATGAAGACATAAATTCAAATGGCTCAATGACACTTTTAGTGAAAGCAGAACATGGACACTCTACTACACCTACTAAATTCTTATGGCATGGTTCTTGCACAAACAAAGACATAAGCATTTCACAAAGTAGAGAGACTTTAACTGGAATCCCTCAATATGTAGTGCAAATTATGAACACATGTGTTTCTTCTGAATGTGCTCCATATAATATTCATCTTCACTGTGGCTGGTTTGCTTCTGCAAGAATAATCAACCCTAAATTGTTCAAGAGACTCTCTTTTGATGATTGTTTGGTGAATGGAGGGAAACCTTTAACCTCTAGTCAAATTATTAGATTCACTTATTTTAATTCCTTTGTTTATCCTCTTTCATTTAAGTCTGCCAAATTTTGCTGA 507 0.359 MTITNYTPLFFLCFIISHVLSNVEIHQDPSTQTLQSFHEDINSNGSMTLLVKAEHGHSTTPTKFLWHGSCTNKDISISQSRETLTGIPQYVVQIMNTCVSSECAPYNIHLHCGWFASARIINPKLFKRLSFDDCLVNGGKPLTSSQIIRFTYFNSFVYPLSFKSAKFC 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04321 168 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 27 168 IPR040361 -
Tsu04g04321 168 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE 27 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04321 Tsu-Chr4 51199677 51201247 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04321 - - aprc:113852241 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04321 04 51199677 51201247 Tsu04g04321 04 51199677 51201247 ECH