Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04319 ATGGAAGATGATTTCCTCGACGACGATTTTGGTGAACTTTACGCCGACCTTCAACTTCCACCTTTTCCACAAGAACCGCAACATCATGATGATAATCATGACGCCGCCAATTTAAACAATAACGACGCTGTTGTCGATGCCGAAGCTGATGCAAATGATGATTATATTGGAACGGATAGTGACGATGATGgtttaaaaatagttttgaaCGACGAAGATTGTCCTCCTCGTGGTGGTGGTGTTTCCGTTGCTTGTGATGACGATAATGTTCATGGTGAAGGTTTCAGCAACAACGCGAAGGAGTGTCTTGATCATCAGTTCAAGATTGGTTCGGAGTTTGTTACTTCTGATAGTTACACTAAAAATGGTGCCAAAGGTGGTTACGGTTCACAATTTTTTCGTTCTAAGTTTATGAAGACTCAAGGATCGATGTTTGTGAATAATAATATGAAGGCAAGTAAGTCAATGGGGTTGAATAAAGAATGCTCATCTTTCACTCAAGGAAGGGGGGATAATATTCAGAATCAGATATCAAGCTCCAGTTACTATGGTGGATCTTTGCTTCCTTGGCATTGGAATATATATGATGTAAACATTGATAAATTGGAGGAGAAGCCATGGAGGATTCCCGGAGCTGACATAACAGATTACTTCAATTTTGGTTTAAATGAGAACACTTGGAAGCAATATTGTTCGTCTTTGGCATCCACACAGGAGCAATTTGATCAACCTGGTTCAGGGAGCTTACATTCTCGCTCCTCAAAGTGTCAAGTGCCAAAGGGCAGAGCAATACAAGTTGAAGACAGTGTGGTTGAGCGCCAGCCATCCATCGATGTGAGGCGTCCGCGCAGTCTAGATTCTGATGTTATTATACAGCAGATCAAGGTGGATGGATCCTCTGACAACAGTTCTGGTTCTGTCAAGAGCAACATACACGATTTATCTGAAGAGGGGGATTTAATTTCAGGCAATAACAGAAACAAAAGCAATTCTTCTAGTGAACATGATGTTTTATCTGAAGAACATATAGAAGATGCTAAAAAATCGGAAGAGTCGTCTGGTCAGGAAAGACATGACCCAATTCCCGATGTGGTTAAAGTTCAGCATCCAGATGGAGAGGACCGAAATTCTGACGATGGTAAAGTGCTGGAGGAAGAAATGAAAACAGAGGAGAGAGTTGGCATTGACACATGCAGTGCAGATCCATGGTGGAGTGAACCAGAATTATCACTTGGTGATCAAGAACTTAGTCTGACTTATTCTGACAATGGTTCTGAAGGAACTGAAGATAGTATACATATTTATAATGAGAGAAATCAGAGCCCTTTAAGAAGTCATCTGGTGAGTTCTGACACCGGCATAAAGGAGTCTTTGTCACTTTATGATAAAACCTCAAAGAACATTAGTGCCAACAGAAAACCAGTAAATATATCTTATTATTCAAGAAATAGAGGTCCAGTACAACAGGATCTGAGGCATCAAATTGGTAGACATATCCCCGGTTCTAAGCtgaaaaaacacaaagaaaatGATAATAATGTCTCTCACATCCCCAGATCCAGTGGAAGGAGTCTGTCTCCCTGGGGTCATCAATTTGTTAATTACAGATCAGATGAACGACTGCAATATTTTGGAAGTCGTGAAAGAAAAGATGTTTCATATAATTGGGAATCAAAACAATCGAACTATCACGGTGCTGACAAAAATGTTGATGACCTGGATCATGCAGTTTACAGTGAATATTCAGATAGGGAAAATGAAGACAGATTCAGGGAGAATGGAAATCAATATATCAGAAAAAATGGGGATAAGAGGGAGTGTTATTTTGAGCGAAGAActctaataaaatataatgaagACAATGATTGGCATCCTACTAGTAGAAAACATTATGTTGATGATGACCCGAGTCTCCTCTCGTATAGGGAGTCAAGGCAGTTTCTTTCAAAGCATTCCTCCTTTCCTGCTAACGATAGAGAAGTTCAAAGGAGGATAATGCATCACAAGCCTCATTTTAAGGATGGAAACCGTGATTATGATCGATGTTTTGATGAAGATGAGTTTGAGTTTTTAAACAGAAGTTATAGAAGGCCCTCTACTTTTGCTGAGAGAGAAATGGAATCTTTGAATAATACACATGAAGAGCAGTTTCTACAAATTGGTAGATCACTAGAAAGATATACAGGAAGGGGTAGGCTTCATGACAGGCCCCCCTTAATTGCGGATACCCTGTGGTCTGGGGAACAGGAAGATGAGTTCCCCCAATATGCACATAATCAGAATTCATATTTGAAGCATCAGAGACAATCTTATACCGATTCAGCAAGACATTATATTCATAGAGTAAATGATGGTTTTAGGGGACATGAGAGACAAAACCAGGCCACCAACAGAGGCAATGACTGGCATTGTGATTATACCGATGCTGCTGAAGATGAAGATTGCACGACTCCTGTAGACGAGTGTGAGTTTTACCCTCTCCCATCTGAGGTTCCACATTGGACCAACAATGATAATATTGTTTGGCATGATGGATTTCATCCTGACGAGGATGCATTATTCTACGACGAAACTCCAAGGCACGAAAGGCATGCAAGAAAGGGAACTTTGCATGCTAGGGTGCAAAGATATGATATAAAATTACAGCAGCATCGGATAAGTTTGTCAAAGAGAGATGGAGACAGCTTTTTGAAAAGAAGCTCTAAGGTTATGAATGGAGATCGCTGTCGCCAGACAGTGCTGAGATGCAGGAAATCAGTTGACATGATTACTTGGGAAGGAAAGTCTGCAAAAAGTTCCAGAGTGATGTACAATGATAGACTAGCAAATGTGGATCAAGGGATTGCTGCGAAGCGGAAAGCTTTGGTAGGTTTTGATGATTCTCGTAAGAAGGCTATCAAATTTGACGTCTCAAAATCTCAGTGTGACAACAAAAATAAGAAGTTACTACAGAACATTCCAGATAAAAGGCAGAAAAAAGGTTTGGATATAGAAGAAGGTGAGATACCAACAGACGAACCGTCCATGGAGGTCTCTGTATCCAGAAAAGGTGTTTCTGAGAGTGCAGCACTTGCTGACAGTGTAAAGAAGAGAATCTCGCAAAATGGAAATAATTCTGAACAGCAGATGAGTAATCTTGACAGCCAGAAGATTCTTGATACATTAGCTAAAATGGAGAAACGTAGGGAGCGCTTCAAGCAGCCCATCAGTGTGATAAAAGAAGCAGAAAAGAGTTCGAAGCTGAACACTGACTCGACAGTTGGTAATGGTGAAATGAAGCAAAATAGGCCAGCTCGAAAGAGGCGCTGGAATGGCGGTTAG 3321 0.4029 MEDDFLDDDFGELYADLQLPPFPQEPQHHDDNHDAANLNNNDAVVDAEADANDDYIGTDSDDDGLKIVLNDEDCPPRGGGVSVACDDDNVHGEGFSNNAKECLDHQFKIGSEFVTSDSYTKNGAKGGYGSQFFRSKFMKTQGSMFVNNNMKASKSMGLNKECSSFTQGRGDNIQNQISSSSYYGGSLLPWHWNIYDVNIDKLEEKPWRIPGADITDYFNFGLNENTWKQYCSSLASTQEQFDQPGSGSLHSRSSKCQVPKGRAIQVEDSVVERQPSIDVRRPRSLDSDVIIQQIKVDGSSDNSSGSVKSNIHDLSEEGDLISGNNRNKSNSSSEHDVLSEEHIEDAKKSEESSGQERHDPIPDVVKVQHPDGEDRNSDDGKVLEEEMKTEERVGIDTCSADPWWSEPELSLGDQELSLTYSDNGSEGTEDSIHIYNERNQSPLRSHLVSSDTGIKESLSLYDKTSKNISANRKPVNISYYSRNRGPVQQDLRHQIGRHIPGSKLKKHKENDNNVSHIPRSSGRSLSPWGHQFVNYRSDERLQYFGSRERKDVSYNWESKQSNYHGADKNVDDLDHAVYSEYSDRENEDRFRENGNQYIRKNGDKRECYFERRTLIKYNEDNDWHPTSRKHYVDDDPSLLSYRESRQFLSKHSSFPANDREVQRRIMHHKPHFKDGNRDYDRCFDEDEFEFLNRSYRRPSTFAEREMESLNNTHEEQFLQIGRSLERYTGRGRLHDRPPLIADTLWSGEQEDEFPQYAHNQNSYLKHQRQSYTDSARHYIHRVNDGFRGHERQNQATNRGNDWHCDYTDAAEDEDCTTPVDECEFYPLPSEVPHWTNNDNIVWHDGFHPDEDALFYDETPRHERHARKGTLHARVQRYDIKLQQHRISLSKRDGDSFLKRSSKVMNGDRCRQTVLRCRKSVDMITWEGKSAKSSRVMYNDRLANVDQGIAAKRKALVGFDDSRKKAIKFDVSKSQCDNKNKKLLQNIPDKRQKKGLDIEEGEIPTDEPSMEVSVSRKGVSESAALADSVKKRISQNGNNSEQQMSNLDSQKILDTLAKMEKRRERFKQPISVIKEAEKSSKLNTDSTVGNGEMKQNRPARKRRWNGG 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04319 1106 MobiDBLite consensus disorder prediction 1063 1080 - -
Tsu04g04319 1106 MobiDBLite consensus disorder prediction 1 40 - -
Tsu04g04319 1106 PANTHER FIP1[III]-LIKE PROTEIN 5 1105 IPR044976 GO:0006397
Tsu04g04319 1106 MobiDBLite consensus disorder prediction 333 381 - -
Tsu04g04319 1106 PANTHER FIP1[III]-LIKE PROTEIN 5 1105 - -
Tsu04g04319 1106 MobiDBLite consensus disorder prediction 296 311 - -
Tsu04g04319 1106 MobiDBLite consensus disorder prediction 993 1018 - -
Tsu04g04319 1106 MobiDBLite consensus disorder prediction 241 261 - -
Tsu04g04319 1106 MobiDBLite consensus disorder prediction 503 523 - -
Tsu04g04319 1106 MobiDBLite consensus disorder prediction 1063 1106 - -
Tsu04g04319 1106 Pfam Fip1 motif 196 234 IPR007854 -
Tsu04g04319 1106 MobiDBLite consensus disorder prediction 241 255 - -
Tsu04g04319 1106 MobiDBLite consensus disorder prediction 296 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04319 Tsu-Chr4 51178832 51186300 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04319 - - mtr:MTR_4g122070 1560.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04319 04 51178832 51186300 Tsu04g04319 04 51178832 51186300 ECH