Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04300 ATGGGTGCGCCAGAGAAACCACAGACTAACGCTAATTCGATGCAGCGTGTCAAGGTGTACCGTCTGAATGATGATGGAAAATGGGATGACCAGGGTACTGGGCATGTAACTATTGATTATATGGAGCGATCAGAGGATCTGGGCTTATTTGTTTATGATGAAGACGACAATGAGACTATACTTTTGCATCGCATCAGTTCTGATGATATTTATAGGAAGCAAGAAGATTCAATTATCTCATGGAGAGATCCAGAATATGCCACAGAACTGGCGCTTAGCTTTCAAGAGCCTAGCGGATGCTCTTACATATGGGACCATATTTGCAATGTGCAGAGGAATATGCATTTCAATACTTTAAATAATGAGCCATTTCAGAGCACTAACAGCGAGTTAAGGGAGTTGCCTGCTGTTGAACTATCAACACTACCTTTGATTCTTAAGACCGTTGTTGACAGCAGCATTTCAGATCAAATACGAGTAACAGAGCTACTATCAAGTAATGAAGAATTTTTCCGAAAGCTGATGGAGTTATTTAGAATGTGTGAAGACTTGGAACACATGGATGGCCTTCACACGATTTACAAAATCGTCAAAGGGATCTTTTTACTTAATAGTCCACCAATTCTTGAGAGAATTTTTAAGGATGAGTTTATAGTGGACATTATCGGTGCCCTTGAGTATGATCCAGAAAGTACTTGTGTCCAGCATCATCGTAAATTCTTAAAGGACCATGTTGTTTTTAAGGAGGCCATACCTATAAAAGATCCCAATGCACTGGCGAAGATACATCAGACATATAGAGTTGGCTATTTGAAGGATATTGTTTTGGCCAGAGTCTTAGATGACGCTACTTGTGCAACCATTAACTCCATAATACATGCAAACAATGCCTTTGTTATTGCTATGTTGAAGGACGACAATACATTTATCCAGGAGTTGTTTGCTAGGTTAAAATCACCCACCACGTCTCAAGAGTCAAAGAAGAACTTGGTCCATTTCTTGTACGAGTTTTGTAGTGTAAGCAAGAGCTTACAGATGGTCCAGCAGCTTCGGCTTTTTAGGGATCTGATGAATGAAGGCATCTTTGACATTGTCAGTGATGTTCTGCAAAGTCAAGACAAAAAACTTGTGCTAACTGGAACAGATATCCTCCTTCTTTTTATGAATCAGGATCCTAATCTTCTGCGATCATATGTTGTTCGGCAGGAAGGAGTTGCTCTTCTAGGACTCTTGGTTAAGGGAATGGTAACAGATTTCGGAGAGAGCATGCATTGCCAGTTTCTTGAGATTCTTCGCATTCTATTGGACTCGAGTACATTGTCTGGACCGCAGAGGGACACTATCATTGACATCTTCTTTGAGAAGCATTTGGGTCAACTGATTGAGGTTATAACAGCGTCATGTCCTTCAGAAAATATTGCCGATGCAAGTATTAAATCAACAAGTCCTGGACAAAGTGTTCAATTTCAGCGCAAAACAAAACCAGAGATATTATTGAACATATGTGAATTACTATACTTTTGTGTCCTTCATCACCCATACAGGATAAAGTGCAATTTCCTTGTCAATAGTGCAATTGAGAACATTTTGCTCCTGACACGGAGAGCAGAAAGATACTTAGTTGTCTGTGCTGTCCGGTTTGTTCGAACTGTTCTCTCCCGCAATGATGAGCATATGCTAAATTATTTCGTAAAGAATAACATTCTCAAACCAATTATAGATGCCTTTGTTGCTAATGGTAATCGTTACAATCTTCTCAACTCTGCTGTTCTGGAACTTTTTGAGTATATTCGGAAGGAGAATGATTTGAAATTATTGCTAAAACACGTAGTTGATTCTTATTGGGGCCAGCTGGTAAAATTTGAGCATTTGGTCTCAATTCACTCGCTGAAAGTAAAATATGAGCAGTGTGTGGATAATGGTGGGACTAATGGTGCTGCGGTAATGGACCTTCGAAGACGAATTGATGAGCGTGCTGtggagagagaagaagaagaacggTATTTTAATGAGGACAGTGATGAGGATGATGTAGCGTCTGTATCTGTTTCACATGATCATAAAGGTCATCAACAGCCTAGTCTTTCCAATGGAGTTACGTCAAACCATCCGCAGTCAAGTCGAAGGTCACTGGTTGACTATGAAGATGACGAGGACGATGAAGATTATAAACCACCACCAAAGAAGCAAAAAGAAACATCAGAGGAAGATGAAGGGATACTGGAGTCTCTCAGGCTGAAAAGGAAACTTCCTTCAAAGGATAAAGATCCCGAACTtgtgaagaagcagaagttAACAAAGAACTCAAAATCTAAAGATAGTGTTTTTGCTGCTTTATGTTCAACATTGAGCCAAGCTGTGTTACCTAGTAAGAAATCTGCAATCAATAACCATACGGGTGCTCAAACAGTTGAAGGGAGGACGAGTTCTAGTGAAGACAATCAGGAAGACAGACAAAATGTTACTAGAAGCAGCTCTGATAATAGCAACATAGGAGCTGAAGATAACGTTGTAGAGAAAGATTCTTCAGCCTCTAGAAGCTTTTCTGATCGTTTGCATGCAAAATCGGATAACATACAATTGGGAGGCGAGGAACGTCCACTGGTTCCTCCTAAATCCTCGGCAGAAATGGCTGTAAATGGATCATAA 2649 0.3952 MGAPEKPQTNANSMQRVKVYRLNDDGKWDDQGTGHVTIDYMERSEDLGLFVYDEDDNETILLHRISSDDIYRKQEDSIISWRDPEYATELALSFQEPSGCSYIWDHICNVQRNMHFNTLNNEPFQSTNSELRELPAVELSTLPLILKTVVDSSISDQIRVTELLSSNEEFFRKLMELFRMCEDLEHMDGLHTIYKIVKGIFLLNSPPILERIFKDEFIVDIIGALEYDPESTCVQHHRKFLKDHVVFKEAIPIKDPNALAKIHQTYRVGYLKDIVLARVLDDATCATINSIIHANNAFVIAMLKDDNTFIQELFARLKSPTTSQESKKNLVHFLYEFCSVSKSLQMVQQLRLFRDLMNEGIFDIVSDVLQSQDKKLVLTGTDILLLFMNQDPNLLRSYVVRQEGVALLGLLVKGMVTDFGESMHCQFLEILRILLDSSTLSGPQRDTIIDIFFEKHLGQLIEVITASCPSENIADASIKSTSPGQSVQFQRKTKPEILLNICELLYFCVLHHPYRIKCNFLVNSAIENILLLTRRAERYLVVCAVRFVRTVLSRNDEHMLNYFVKNNILKPIIDAFVANGNRYNLLNSAVLELFEYIRKENDLKLLLKHVVDSYWGQLVKFEHLVSIHSLKVKYEQCVDNGGTNGAAVMDLRRRIDERAVEREEEERYFNEDSDEDDVASVSVSHDHKGHQQPSLSNGVTSNHPQSSRRSLVDYEDDEDDEDYKPPPKKQKETSEEDEGILESLRLKRKLPSKDKDPELVKKQKLTKNSKSKDSVFAALCSTLSQAVLPSKKSAINNHTGAQTVEGRTSSSEDNQEDRQNVTRSSSDNSNIGAEDNVVEKDSSASRSFSDRLHAKSDNIQLGGEERPLVPPKSSAEMAVNGS 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04300 882 MobiDBLite consensus disorder prediction 789 882 - -
Tsu04g04300 882 PANTHER ATP SYNTHASE GAMMA-RELATED 1 812 - -
Tsu04g04300 882 SUPERFAMILY PH domain-like 15 111 - -
Tsu04g04300 882 MobiDBLite consensus disorder prediction 821 836 - -
Tsu04g04300 882 MobiDBLite consensus disorder prediction 839 860 - -
Tsu04g04300 882 MobiDBLite consensus disorder prediction 722 769 - -
Tsu04g04300 882 PANTHER BINDING PROTEIN-RELATED 1 812 - -
Tsu04g04300 882 SUPERFAMILY ARM repeat 124 595 IPR016024 -
Tsu04g04300 882 MobiDBLite consensus disorder prediction 789 809 - -
Tsu04g04300 882 Pfam Phosphatase 4 regulatory subunit 3 167 356 IPR006887 -
Tsu04g04300 882 Gene3D - 10 130 IPR011993 -
Tsu04g04300 882 MobiDBLite consensus disorder prediction 685 708 - -
Tsu04g04300 882 MobiDBLite consensus disorder prediction 662 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04300 Tsu-Chr4 51085776 51100668 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04300 K17491 - gmx:100786790 1356.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04300 04 51085776 51100668 Tsu04g04300 04 51085776 51100668 ECH
Tsu04g04300 04 51085776 51100668 Tsu07g01754 07 17294998 17310137 PCT