Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04294 atggtTACGAAACAGGACATAGATGAACTTCCAAAGAACGCGGCTAACTACACAGCTTTAACACCTTTATGGTTCTTAGAAAGAGCTGCTAAGATTCATCCAACCACAAAATCAATCATCCATGGATCCCTTCATTACACGTGGCATCAGACTTATCAACGTTGCCGTCGATTCGCTTCCGCTCTTTCTAATCACTCCATCACACTCGGACACACTGTAGCTGTTATTGCACCAAATATTCCAGCTCTCTATGAAGCTCATTTTGGGATTCCAATGGCAGGGGCAGTGTTGAACCCTGTGAACATAAGGCTAAATGCATCAACAGTAGCATTTCTTCTTGGTCATTGCAATGCATCAGTCGTAATTGTGGATCAAGAGTTCTTTACATTGGCAgaagaagctttgaaaatatGGTCCgaaaaaaccaaaacattcAAGTCTCCGATTTTGATTGTCATCGGCGATGAAAACTGCGACCCTGCGTCACTTAAATATGCGTTGAGCAAAGGAGCCATTGATTATGAGGACTTTCTTCGAAGTGGTGACCCTGAATATGATTGGAAACCACCAGAGGATGAGTGGCAGAGTATTGCTTTGGGTTACACGTCTGGGACCACTGCTAGCCCAAAAGGTGTGGTTTTGCATCACCGTGGAGCGTATCTCATGTCTCTTAGCGGTGCACTTATTTGGGGAATGAATGAAGGAGCTGTATATCTTTGGACTCTACCCATGTTTCATTGCAATGGTTGGTGCTACACTTGGACACTTGCAGCTCTCTTTGGCACAAACATATGCCTCCGTCAGGTATCAGCAAAGGCAGTATATGAAGCCATTGCCAAGTACAAAGTGACTCATTTTTGTGCAGCACCAGTGGTGCTTAACTCGATAATTAATGCTCCTGCTGAGGAAACCATACTTCCTCTACCTCATGTTGTACATGTGAATACCGCCGGTGCTGCTCCTCCTCCTTCTGTGCTTTCCGGCATGTCTGAACGAGGATTTCGTGTCACACACACTTACGGTCTTTCAGAAACCTTTGGCCCATCTGTCTATTGTGCTTGGAAACCAGAGTGGGACTCACTTCCACCAGAATCCAGAGCCCGACTCCATGCAAGACAAGGGGTTAGGTACATTGCTTTGGAAGGCCTGGACGTAGTGAACACAAAAACAATGCAGCCTGTTCCTGCTGATGGTAAAACTGTTGGTGAGATCGTGATGCGTGGTAATGCTGTGATGAAAGGTTACTTAAAGAATCCTAAAGCTAATGAAGAGAGCTTTGCAAATGGATGGTACCATTCCGGCGATCTTGCTGTAAAGCATCCAGATGGATATATAGAAATTAAAGACAGATCAAAGGACATCATCATCTCGGGCGCTGAAAATATCAGCAGTGTAGAGGTAGAGAATGCTCTCTATTCGCATCCTGCGATACTGGAGACATCGGTGGTTGCAAGGCCAGATGAGAAATGGGGTGAGTCTCCCTGTGCATTTGTGACATTAAAGCCAGGAGTGGATAGTAGTAACGAGCAGCGTCTAGTTGATGATATACTGAAATTCTGCAAGGCCAAGATGCCTGCTTATTGGGTTCCGAAATCGGTTGTCTTTGGACCATTACCTAAGACAGCTACTGGGAAGGTACAGAAGCATCTGCTGAGGGCCAAGGCAAAGGAGATGGGGCCTGTCAAGAATAAGATGAGCAAGTTGTAA 1707 0.4458 MVTKQDIDELPKNAANYTALTPLWFLERAAKIHPTTKSIIHGSLHYTWHQTYQRCRRFASALSNHSITLGHTVAVIAPNIPALYEAHFGIPMAGAVLNPVNIRLNASTVAFLLGHCNASVVIVDQEFFTLAEEALKIWSEKTKTFKSPILIVIGDENCDPASLKYALSKGAIDYEDFLRSGDPEYDWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMNEGAVYLWTLPMFHCNGWCYTWTLAALFGTNICLRQVSAKAVYEAIAKYKVTHFCAAPVVLNSIINAPAEETILPLPHVVHVNTAGAAPPPSVLSGMSERGFRVTHTYGLSETFGPSVYCAWKPEWDSLPPESRARLHARQGVRYIALEGLDVVNTKTMQPVPADGKTVGEIVMRGNAVMKGYLKNPKANEESFANGWYHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEVENALYSHPAILETSVVARPDEKWGESPCAFVTLKPGVDSSNEQRLVDDILKFCKAKMPAYWVPKSVVFGPLPKTATGKVQKHLLRAKAKEMGPVKNKMSKL 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04294 568 Pfam AMP-binding enzyme 27 457 IPR000873 -
Tsu04g04294 568 Gene3D - 453 560 IPR045851 -
Tsu04g04294 568 Gene3D - 5 452 IPR042099 -
Tsu04g04294 568 PANTHER ACYL-ACTIVATING ENZYME 5 563 - -
Tsu04g04294 568 CDD ttLC_FACS_AEE21_like 17 553 - -
Tsu04g04294 568 SUPERFAMILY Acetyl-CoA synthetase-like 13 557 - -
Tsu04g04294 568 Pfam AMP-binding enzyme C-terminal domain 466 545 IPR025110 -
Tsu04g04294 568 PANTHER DEPENDENT LIGASE, PUTATIVE-RELATED 5 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04294 Tsu-Chr4 51033438 51036576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04294 5 561 Miscellaneous Gene Families AT3G16910 75.090 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04294 K01913 - gmx:100808187 1054.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04294 04 51033438 51036576 Tsu04g04294 04 51033438 51036576 ECH