Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04016 ATGAATTATTGTGAGACAAATTGTGTTGTCAAAAGgaaaggtaataataataataaagaaactgATGAAACGTTGTCGTTTACACAGTCTACAAACATGATCTCACATCAAGAACAAAATGATCGGAACAGAGGAAAACGATACAGTCTTGTGTCGTTTTGGGAATTACCAAATTACATGAAGgataatgaatatattttacGTTATTACAGAGCTAATTGGCCTCTTAAAGAAGCTTTTTTCAGTCTCTTTCGTTGGCATAATGAAACTCTAAATGTTTGGACACATTTAGTTGGTTTTTTTCTGTTTCTTGGGTTGACCTTAGCCAATTTGATGAAGCCTCATGTGGTGGATCTCTTACAACAATttacaagGTCTTTCTCTTCAGGTGCtgaaaaaaatgtttctgataGCATCAAAGATTTCCTGGGAACGGCGTTACTCTTTGATCTAAATAATCAAGCACCGTTGAAAATGGAAATTGAAGCCTTAGAATTTGTTATAGCAAGATGGCCATTCTTTGTTTTCTTGGGAGGTTCTATGTTCTGTCTCCTCTCTAGCAGCATTTGTCACCTCTTTTCATGTCACTCCCATGACTTGAACCTCTTTCTGTTAAGAATAGACTATGTCGGAATCGCTGTGATGATCATAACCTCATTCTTCCCTcaaatttactatattttcctgtgtcaacctcattggCAAATCATCTACCTAGCTGGTATTACAGCCATGGGACTATTCACCATTGTAACATTGCTTTCACCGTCACTTTCGACTGGCAAACACCGTGCGTTTCGAGCCATGTTGTTCTGTTCGATGGGACTTTTCGGTATTGTGCCTGCAATTCATGCTTGTATTGTGAATTGGGGCAATCCTCGACGCAATATTACGCTAGCATATGAATGTGTCATGGCATTATCTTACTTGATAGGGACTTTGTTCTACGTGACTCGGATACCAGAAAGATGGAGGCCTGGTTGGTTTGATTTAGCAGGACATAGTCATCAAATATTTCATGTTCTTGTGGTGGTTGGTGCATTAGCACATTATGCAGCTACTCTTAAAATGCTCGAATGGCGTGACACTTTCGGGTGTGACAGGGCTTAA 1110 0.364 MNYCETNCVVKRKGNNNNKETDETLSFTQSTNMISHQEQNDRNRGKRYSLVSFWELPNYMKDNEYILRYYRANWPLKEAFFSLFRWHNETLNVWTHLVGFFLFLGLTLANLMKPHVVDLLQQFTRSFSSGAEKNVSDSIKDFLGTALLFDLNNQAPLKMEIEALEFVIARWPFFVFLGGSMFCLLSSSICHLFSCHSHDLNLFLLRIDYVGIAVMIITSFFPQIYYIFLCQPHWQIIYLAGITAMGLFTIVTLLSPSLSTGKHRAFRAMLFCSMGLFGIVPAIHACIVNWGNPRRNITLAYECVMALSYLIGTLFYVTRIPERWRPGWFDLAGHSHQIFHVLVVVGALAHYAATLKMLEWRDTFGCDRA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04016 369 PANTHER ADIPOR/PROGESTIN RECEPTOR-RELATED 28 367 IPR004254 GO:0016021
Tsu04g04016 369 Pfam Haemolysin-III related 84 351 IPR004254 GO:0016021
Tsu04g04016 369 PANTHER HEPTAHELICAL TRANSMEMBRANE PROTEIN 1 28 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04016 Tsu-Chr4 48842249 48845107 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04016 K07297 - gmx:100799310 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04016 04 48842249 48845107 Tsu04g04016 04 48842249 48845107 ECH
Tsu04g04016 04 48842249 48845107 Tsu03g02770 03 37005430 37010141 PCT