Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03960 atgcTGATGATTACCGCCTGGATCACTGACTTCTTCGCTTGCATGGGTGGTTGTTTTGGATGCTGTGTGAAACCTACACCAATTATTGCTGTCGATGAGCCGGCCAAAGGACTAAGAATTCAAGGGCAGACAATGAGAAAACCAACCGCATCAGATGGATTCTGGAGTTCTAGCCCTTGTGATCTGGATAACAGCACAATTCAATCTCAACGAAGTATATCATCTGTCAGCACTTTAAATCAAATCCTGTATCAAAGCAATGGAACTTCTACTGCAGGCACCGATCCTGAATTTGTAAACCAAGGTCTTCTTCGTTGGAATGAAGGCAGACTTCAGTGGGTTGGACAGGGCTTATCTGAGAAGCAAAGCcaacaaaaacaagaatcccGACTAAAGTATGTCATCAACTGCATTACATTTGGCACAATTAACTATATACACTCTAGCTAA 450 0.4067 MLMITAWITDFFACMGGCFGCCVKPTPIIAVDEPAKGLRIQGQTMRKPTASDGFWSSSPCDLDNSTIQSQRSISSVSTLNQILYQSNGTSTAGTDPEFVNQGLLRWNEGRLQWVGQGLSEKQSQQKQESRLKYVINCITFGTINYIHSS 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03960 149 Pfam Protein of unknown function (DUF4050) 58 129 IPR025124 -
Tsu04g03960 149 PANTHER OS07G0479600 PROTEIN 3 134 - -
Tsu04g03960 149 PANTHER DUF4050 FAMILY PROTEIN 3 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03960 Tsu-Chr4 48299445 48303218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03960 - - mtr:MTR_4g114620 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03960 04 48299445 48303218 Tsu06g00204 06 1692999 1694593 ECH
Tsu04g03960 04 48299445 48303218 Tsu07g00651 07 5167403 5170893 ECH
Tsu04g03960 04 48299445 48303218 Tsu01g00693 01 6100534 6105788 ECH
Tsu04g03960 04 48299445 48303218 Tsu04g03960 04 48299445 48303218 ECH