Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03849 ATGGTGGCCACTGGTGCTACTTCATTTTTTCCGGTTACTTCATCCTTGCCAGACTCTGGTGGCAACAAACTTGGTAGTGGGAGTACGAACCTTGGTGGGCTTAAATCTAAACACACGTCTTCTGGTGGTTTGCAAGTAAAGGCAAATGCCCATGCCCCTCCAAAGATTAATGGAACCAAAGTTTCTACATCTGTAGAAAACTTTAAGCACGGGGATGTTTTGCCTTCGTCGCAATCCTCTAGGACTTTTATCAACCAGTTACCTGACTGGAGCATGCTTCTTGCTGCCATCACAACAATTTTCTTGGCAGCAGAAAAGCAGTGGATGATGCTTGATTGGAAGCCAAGGCGGTCTGACATGCTTATTGACCCCTTTGGTATAGGCAAAATTGTTCAGGATGGTCTTGTGTTCAGTGAAAACTTTCCTATTAGGTCGTATGAAATTGGCGCGGATCGAACGGCGTCTATAGACACAATAATGAATCATTTGCAGGAAACTGCACTTAATCATGTTAAGATTGTGGGGCTTCTTGGCGATGGCTTTGGTTCTACGCCTGAAATGTGCAAAAAGAATTTGATATGGGTAGTTGCAAGGATGCAAGTTGTCGTTGATCGTTATCCTACGTGGGGAGATGTTGTTCATGTAGAAACTTGGGTTTCTGCATCGGGCAAGAATGGTATGCGTCGTGATTGGCTTTTACGTGACTATAATACTGGTGAAATCTTGACGAGAGCCTCTAGGTAA 744 0.4422 MVATGATSFFPVTSSLPDSGGNKLGSGSTNLGGLKSKHTSSGGLQVKANAHAPPKINGTKVSTSVENFKHGDVLPSSQSSRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRSDMLIDPFGIGKIVQDGLVFSENFPIRSYEIGADRTASIDTIMNHLQETALNHVKIVGLLGDGFGSTPEMCKKNLIWVVARMQVVVDRYPTWGDVVHVETWVSASGKNGMRRDWLLRDYNTGEILTRASR 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03849 247 MobiDBLite consensus disorder prediction 20 46 - -
Tsu04g03849 247 Gene3D Hotdog Thioesterase 127 247 - -
Tsu04g03849 247 Pfam Acyl-ACP thioesterase 134 245 IPR002864 GO:0006633|GO:0016790
Tsu04g03849 247 Pfam Acyl-ATP thioesterase 1 123 IPR021113 GO:0016790
Tsu04g03849 247 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 1 246 - -
Tsu04g03849 247 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 131 246 IPR029069 -
Tsu04g03849 247 CDD 4HBT 137 245 - -
Tsu04g03849 247 MobiDBLite consensus disorder prediction 20 60 - -
Tsu04g03849 247 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 1 246 IPR045023 GO:0006633|GO:0016297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03849 Tsu-Chr4 47394703 47399703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03849 1 246 Acyl Lipid Metabolism Gene Families AT1G08510 74.104 1.23e-123 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03849 K10781 - gmx:100170693 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03849 04 47394703 47399703 Tsu04g03849 04 47394703 47399703 ECH