Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03841 ATGGCGAAGCCTCGCAAGCCCAAGCCCGAAGACCCAAAGCCCGAAAACTCAGGCGCTGTAGTTCACCATCAAAGGCTATGTCTCTCTATTGACATGGATAAACGCTTGGTTTACGGGTATACTGAATTGGAAATTGCTGTGCCGGAAATTGGGATCGTTGGGTTACATGCGGAGAATTTAGGGATTGAAAGTGTTTGGGTTGATGGTGAAACTACGGAGTTTGAGTATTATCCTCATCAGTATCAGCAGAATGAGGATGAAAAACGATGGAGTTCGGTTTCTTCTCCTAGCTCTGCTGCTGATGCTGCTGTTTCAGTGTATTTGTCTTCTTTGGAGAAAGAGCTTGTTCCTAATTTGCTCATTAATTGCTTTAAACCTTTCAAGACTGATACTGAACAGAAGCAGCCGGAGCAGGAGCAACCTGTTGCTGAAAATGGGTTTCATTCGTCAGCCGAGCCTAAGCAGAATGTGAGAACAGTTCGTATTCACTATAGCATAGAAAAGGCAGAGACAGGAATCCACTTCAGAGATAATGTTCTTCACACCGATAATCAGATAAGGAGGGCAAGGTGTTGGTTCCCTTGTATAGATGACAATTTACAGCAATGCTGCTATGACTTGGAGTTCACTGTAGCACACAATCTCATGGCTGTCAGCACTGGAAGCTTGCTATACCAGGTCTTAAGCAAGGACAATCCTCCTCGGAAAACATATGTCTATAAGTTAGATGTTCCGGTTGCTGCAAGGTGGATATCGTTGGCTGTTGCCCCATTTGAATTTCTTCCCGATCATGAATTTGGCTTCATATCACATATGTGTTTGCCACCTAATTTGACCAAAATGCAGCATACAGTGGAGTTCTTCCATAGCACCTTCAGCTGCTATAAGGATTATCTTTCTGTAGACTTCCCATTCGACTCGTATAAGCAAGTTTTTCTAGAGCCTGAGATGGCAGTTTCATCATTGAGTTTAGGAGCCTCTATGAGTATATTTAGTTCCCAAGTTTTGTATGACGAGAAAGTTATTGACCAGACTATTGATACAAGGGTAAAACTTGCTTATGCACTTGCAAGGCAGTGGTTTGGTGTGTATATCACTCCTGAGTCACCAAACGATGAGTGGCTCTTGGAAGGGCTCGCCGGTTTCTTAGCAGATTTTTATATTAAGAAGCATTTGGGTAATAATGAGGCGCGGTACCAGAGATACaagGCAAATTGTGCTGTTTGCAAAGTTGATAATGGTGGAGCAACAATTTTGAGCTGTTCAGCTTCTTGTAAGGATTTATATGGAACACAGTGCATTGGTTTGTACGGAAAAATAAGAGCATGGAAATCTGTGGCTGTTGTTCAGATGTTGGAAAAGCAAATGGGTCCTGAATCTTTCCGTAGAATTTTGCAAACTATAGTTACTCGGGCTCAAGATAAAACACGTTCAGTGAAAACACTTAGTACTAAAGAGTTTCGACATTTTGCTAACAAGGTTGGAAATCTAGAACGTCCTTTTCTTAAAGATTTCTTCCCACGTTGGGTCGGTTCTTGTGGATGTCCTGATTTAAGGATGGGGTTTTCCTATAACAAACGGAAGAATATTGTTGAATTGGCTGTGTTGAGGGGATGCACATCATTGCAGACTTCAAGTACAGCCGTTCTTGATATTAATCCAGATACTGAAAATCGAGACGGGGATTCTGGATATCCTGGTATGATGAGTATCAGGGTGTATGAACTTGATGGCATGTATGACCATCCTATTCTACCAATGGCTGGAGAAGCATGGCAGCTTTTGGAAATTCAATGCCACTCAAGGCTTGCTGCTAGACGATTTCAGAAATCAAAGAAAGGTGTAAAACATGATGGCTCTGATGACAACGGCGACGTGCCTTCAATGGATATACGCTCCAGTACAGAGTCTCCTTTATTATGGATCAGAGCAGATCCTGACATGGAGTACCTTGCTGAGGTTCATTTTAATCAACCGGTTCAGATGTGGATCAACCAATTAGAGAAGGACAAAGATGTTATTGCTCAGGCACAGGCAATTGCAGCCCTTGAGGCATCACCCCAGATATCATTTTCTGTTGTAAATGCCCTGAACAGTTTTCTTACCGACTCCAAGGCTTTCTGGAGAGTAAGAATCGAAGCAGCATTTGCATTGGCAAATTCAGCATCCGAGGAAACTGATTTTTCTGGTCTACTCCATTTGGTGAAATTTTACAAGAGTCGAAGATTTGATCCTGACATTGGACTCCCAAAGCCAAATGATTTTCATGATTTTGCCGAGTATTTTGTTCTTGAGGCCATTCCACACGCTGTAGCTACGATTAGAGCTGCTGACAAGAAAAGTCCAAGAGAGGCTATCGAATTTGTTTTACAACTATTGAAGTACAATGACAACACTGGGAACCCTTACTCAGATGTCTTCTGGCTTGCTGCATTGGTCCAATCAATTGGCGAGTTTGAGTTTGGGCAACAGAGTATTCTCCTATTGTCATCACTCCTCAAGCGCATTGACCGCCTTTTACAATTTGATAGTCTCATGCCAAGCTATAATGGAATCTTGACTGTCAGTTGTATCCGGACATTGGCGCAGATTGCACTAAAGCTTTCAGGATTCATTCCTCTTGATCGCGTATATGAACTTGTGAAGCCTTTCCGAGACCTAAAGACAATTTGGCAAGTTCGAATTGAAGCAAATAGAGCACTCCTTGATCTCGAATTCCACTGCAAGGGCATTGATGCAGCACTTTTATTATTTGCCAAATATGTTGAAGAGGAGCCTTCCTCAAGAGGCAAGTTAAAACTGGCCACCCATGTCATGAGGTTATGCCAGATGAGAGATGGTTTGAATTCAGATGATGAAATTACAAGCCAAACTCTTGTCTCTTTGCTGAGTTTACTGGAAGGGCGTATGGCATTTAATAACATCTTTCTCCGTCACTACTTGTTCTGCATATTACAAATACTGGCAAAAAGACCCCCAACTCTACATGGAATTCCCAGAGAAAGTAGAATGTTGCATATGAGTCTTACAGAAGCTTCTAACTATCAGAGGAACCTATTTGTTCTTGATTCCGAAAGTAAACCTTTGGAACTGCCAAGTTCCACCGAAAACCTTGCACGAGATTTGATCATAACTGAGGATTTAAGGGACCAAACTTTTGATGCTCCCAAGGACCAAACTTTTGATACTCCCAAGGACCAAACTTTTGATGCTCCCAAGGACCAAACTTTTGATGCTCCTATGGACCAATCTTTTGATGCTCCTATGGACCAAACTTTTGAAGCTCCCAAAGAAGTACATGTTGAAGCTCTGGAAGTGCCTCTCGAGATTCGTAAAGAAGACTTAACAGGATTTCCCCCTGCAGCACCAACTGAAGCTCTCAATGAAATTTCCAAGGAAGCCGATACTGTATCCAATAGCCATGAAAGAAAAAGGCTAATCAAAATCAAGGTTAAACAATCTTCTGCCACTAGTAGGGCTGATACTGATAATCAAATGGTTGAACGCTCTTTAGGTGGTCGTGAAATTGATCACGGAGCTAGCAGTTCAGTTTCAGTAGATGCACCTCAGAGATTTGCCGAGACTATTAGCATCGGTAATAACAATATTGAGGAAGTTAATTCTTGGCATGGTCCTGGTTCCCGCATGACTGCAAGCATTGGCAGTGTAAAAATTTTGAGTGATGGTGATGAATTGGTCAAAGAACTCCAATGCACTGCTGATTCAAGTGTAGTTTACTCACAACCTCAGCCAGAAGATCCTTCACCATCTAGTTTTATTCAAGATAACAATATAGATGCTGATGCACGTCGATTTGCCAGCCTTCAAACACTTTCAGTTGGTAGATTGGATGGAGAATCATTTGGCAAAGAAGTTCCTGCTCGTGTGAAAGATAAACACAAAAGTAAGGATAAGAAACGGAAAAGTCACAAAGGACACCATGATGACCCGGAATATTTGGAGCGAAAACGattgaagaaagagaaaaaacgCAAGGAAAAAGAATTGGCAAAACTACAAAGTATAGAAGCAAAGAAACCCTCCATAGACTTGTCATGTAAGAAAGAGGAACCTGAAGTGGGCAATGTGAAGCAGCAGCTGAAATCTGTTGAACCCAGCGGTAATAATTCTATATCAGACATTGGAAAGGTTGATACCAAACCCCGGGCATCCGACATTGGGAAGGTTGATACCAAACCCCAGGCATCCGACATTGGAAAGGTTGATACCAAACCCCGGTCATCCGACATTGGAAAGGTTGATACCAAACCCCGGGCATCCGAAGGTACATCTGGTGCGCCCAAAATTcgtattaaaattaaaaatcgaATGCTCAGCAAGTCATAG 4347 0.4194 MAKPRKPKPEDPKPENSGAVVHHQRLCLSIDMDKRLVYGYTELEIAVPEIGIVGLHAENLGIESVWVDGETTEFEYYPHQYQQNEDEKRWSSVSSPSSAADAAVSVYLSSLEKELVPNLLINCFKPFKTDTEQKQPEQEQPVAENGFHSSAEPKQNVRTVRIHYSIEKAETGIHFRDNVLHTDNQIRRARCWFPCIDDNLQQCCYDLEFTVAHNLMAVSTGSLLYQVLSKDNPPRKTYVYKLDVPVAARWISLAVAPFEFLPDHEFGFISHMCLPPNLTKMQHTVEFFHSTFSCYKDYLSVDFPFDSYKQVFLEPEMAVSSLSLGASMSIFSSQVLYDEKVIDQTIDTRVKLAYALARQWFGVYITPESPNDEWLLEGLAGFLADFYIKKHLGNNEARYQRYKANCAVCKVDNGGATILSCSASCKDLYGTQCIGLYGKIRAWKSVAVVQMLEKQMGPESFRRILQTIVTRAQDKTRSVKTLSTKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPDLRMGFSYNKRKNIVELAVLRGCTSLQTSSTAVLDINPDTENRDGDSGYPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSRLAARRFQKSKKGVKHDGSDDNGDVPSMDIRSSTESPLLWIRADPDMEYLAEVHFNQPVQMWINQLEKDKDVIAQAQAIAALEASPQISFSVVNALNSFLTDSKAFWRVRIEAAFALANSASEETDFSGLLHLVKFYKSRRFDPDIGLPKPNDFHDFAEYFVLEAIPHAVATIRAADKKSPREAIEFVLQLLKYNDNTGNPYSDVFWLAALVQSIGEFEFGQQSILLLSSLLKRIDRLLQFDSLMPSYNGILTVSCIRTLAQIALKLSGFIPLDRVYELVKPFRDLKTIWQVRIEANRALLDLEFHCKGIDAALLLFAKYVEEEPSSRGKLKLATHVMRLCQMRDGLNSDDEITSQTLVSLLSLLEGRMAFNNIFLRHYLFCILQILAKRPPTLHGIPRESRMLHMSLTEASNYQRNLFVLDSESKPLELPSSTENLARDLIITEDLRDQTFDAPKDQTFDTPKDQTFDAPKDQTFDAPMDQSFDAPMDQTFEAPKEVHVEALEVPLEIRKEDLTGFPPAAPTEALNEISKEADTVSNSHERKRLIKIKVKQSSATSRADTDNQMVERSLGGREIDHGASSSVSVDAPQRFAETISIGNNNIEEVNSWHGPGSRMTASIGSVKILSDGDELVKELQCTADSSVVYSQPQPEDPSPSSFIQDNNIDADARRFASLQTLSVGRLDGESFGKEVPARVKDKHKSKDKKRKSHKGHHDDPEYLERKRLKKEKKRKEKELAKLQSIEAKKPSIDLSCKKEEPEVGNVKQQLKSVEPSGNNSISDIGKVDTKPRASDIGKVDTKPQASDIGKVDTKPRSSDIGKVDTKPRASEGTSGAPKIRIKIKNRMLSKS 1448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03841 1448 Coils Coil 1320 1345 - -
Tsu04g03841 1448 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 271 518 - -
Tsu04g03841 1448 MobiDBLite consensus disorder prediction 1243 1262 - -
Tsu04g03841 1448 Pfam Peptidase family M1 domain 285 483 IPR014782 GO:0008237|GO:0008270
Tsu04g03841 1448 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 19 1341 IPR037813 GO:0005669
Tsu04g03841 1448 CDD M1_like_TAF2 23 510 - -
Tsu04g03841 1448 MobiDBLite consensus disorder prediction 1348 1362 - -
Tsu04g03841 1448 SUPERFAMILY ARM repeat 454 993 IPR016024 -
Tsu04g03841 1448 MobiDBLite consensus disorder prediction 131 150 - -
Tsu04g03841 1448 Gene3D Neutral Protease Domain 2 268 514 IPR027268 -
Tsu04g03841 1448 MobiDBLite consensus disorder prediction 1366 1382 - -
Tsu04g03841 1448 MobiDBLite consensus disorder prediction 610 631 - -
Tsu04g03841 1448 Gene3D tricorn interacting facor f3 domain 20 255 IPR042097 -
Tsu04g03841 1448 MobiDBLite consensus disorder prediction 1291 1448 - -
Tsu04g03841 1448 MobiDBLite consensus disorder prediction 1402 1423 - -
Tsu04g03841 1448 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 17 256 IPR042097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03841 Tsu-Chr4 47262722 47277747 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03841 K03128 - gmx:100792795 2228.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03841 04 47262722 47277747 Tsu04g03841 04 47262722 47277747 ECH