Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03830 ATGATGGATTTGGAACTGATTTCAAACATGGATCCTGTAAATATTGGACTTGGTTGTTCAGAAAAGACAATTCCTGTTActtcttcttcaatcaagccaagaaagaaaacaatGACTTCAgtttatttgaagttttttgAGACTGCTACTGATGGCAAGACTAGGAGATGCAAGTTTTGTGGACAGACTTATTCCATTGCAACCGCCACAGGAAATTTGGGGAGGCATCTTGCTAATCGCCATCCGGGCTACGATAAGACAGGGGAAGCTGTAAGCAATTCGGTAACTCGGTCCAATACCGTTGTGATCAAGAAATCTCAGGCTCAAGGAAAATCAAACCAAGTGGATTATGATCATCTAAATTGGTTACTCGTTAGGTGGCTTGTTTTAGCTTCTCTCCCTTCTTCAACTCTAGAAGAAAAGTGGCTCGTGAATTCTTTCAAGTTTCTAAACCCATCTGTACAAATTTGGCCTAGTGACAAGTACAAAACTGTACTTGATGAAGTTTTTGGAAGCATGAGGGAAGATGTAAGAACATTGTTAGAACAGGTTGCTTTTAAGTTCTCCATCACACTTGATTTCTGGACTTCTTTTGAACAGAACTTCTATATGAGTGTAACATGTCAGTGGATTGATGAAAACTGGTGCTTCCAGAAGTTGCTTCTTGACATCTGTCGTGTACCATATCCATGTGGGGGTGCAGAAATCTATCGTTGCCTCATAAAAGTTCTTAAATTTTACAATATTGAAAGCAGAATCCTGTCATGTACCCACGACAATAGTTCAAGTGCCATACATGCTTGCCATACTTTGAAAGAGGACTTTGATGGTCAGAAAATAGGACCATTCTGTTATATACCATGCGCTGCTCAAACTTTGAACCTGATAATAGATGATGGGTTGAGATCTGGAAAACAAGTAATTTCAAAGATCAGAGAATTTGTAATGGAGTTAAATGCATCACTGGTAATCTCTGAGGATTTTATTCAAATCTCTACTGCTTATCAAGAAGGTACTTGGAAATTTCCTCTTGATGTTTCAGCAAGGTGGAGTGGAAACTACCAAATGCTTGATCTTGTTTGCAAGGCTGGTAAATCAGTGGATGCGATTATTCGTAAATATGAAGAGACACTAGGCAGTAGGATACTGCTGAGTCCTTCTGATAAAAGTGTGGTTAACATCATGCATCAATATCTCGAGCCATTCTACAAGACCACAAACGACATATGCACGAGCAAGGTGCCAACGATTGGGCTTGTCCTTTTCTTCATGGATCATATCTCAGAAACAATTGCTACCTGCAAAGAATCACGTCCCAGTCCAGAATGGCTAAAAAGTGCTGCAGAAGAAATGGCTAAAAAGGCTAGAAATTATACTAATCAGGTTTGcaacatatttacatatatgaCAGCTATTCTAGATCCTCGAATAAAGGGAGAGTTGATCCCGGATAGTTTAAACTCGCAAAGTTATCTTGACGAAGCAAGGGcatattttataagaaactaTTCTATTAACCATTTCAACTCCATGAGTTCTGGTTACAATGcacaagaaattgaagatggaggAAATGTTTCCTTTGCCGAGGAAATAGCTCGCAAAAAACGTAGGACAAACATGAGCTCTGCCACTGATGAGCTTACACAGTACTTGTCAGAGGCTCCAGCTCCAATAGCAACCGATGTTCTAGAGTGGTGGAAGGTAAACAGTACACGCTACCCTCGGCTATCTGTGATGGCTAGAGATTTCTTGGCTGTGCAGGCAACTTCAGTAGTGCCCGAGGAACTTTTCTGTGGCAAGGGTGATGAAATTGACAAGCAACGATTTTGTATGCAGAATGATAGCACACAAGCTGTTCTTTGTATCAAGTCATGGATTCAGGTTGGAATCAAGTTTAAGTATAAATCGACGGAGATAGATTATGAGAGGTTGATGGAACTAGCAGCTGCTTCTGCAACACATAATAATATCCCTTCAAGTTCTGAGAAGAAGCAAAAATAG 2004 0.3827 MMDLELISNMDPVNIGLGCSEKTIPVTSSSIKPRKKTMTSVYLKFFETATDGKTRRCKFCGQTYSIATATGNLGRHLANRHPGYDKTGEAVSNSVTRSNTVVIKKSQAQGKSNQVDYDHLNWLLVRWLVLASLPSSTLEEKWLVNSFKFLNPSVQIWPSDKYKTVLDEVFGSMREDVRTLLEQVAFKFSITLDFWTSFEQNFYMSVTCQWIDENWCFQKLLLDICRVPYPCGGAEIYRCLIKVLKFYNIESRILSCTHDNSSSAIHACHTLKEDFDGQKIGPFCYIPCAAQTLNLIIDDGLRSGKQVISKIREFVMELNASLVISEDFIQISTAYQEGTWKFPLDVSARWSGNYQMLDLVCKAGKSVDAIIRKYEETLGSRILLSPSDKSVVNIMHQYLEPFYKTTNDICTSKVPTIGLVLFFMDHISETIATCKESRPSPEWLKSAAEEMAKKARNYTNQVCNIFTYMTAILDPRIKGELIPDSLNSQSYLDEARAYFIRNYSINHFNSMSSGYNAQEIEDGGNVSFAEEIARKKRRTNMSSATDELTQYLSEAPAPIATDVLEWWKVNSTRYPRLSVMARDFLAVQATSVVPEELFCGKGDEIDKQRFCMQNDSTQAVLCIKSWIQVGIKFKYKSTEIDYERLMELAAASATHNNIPSSSEKKQK 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03830 667 Pfam Domain of unknown function (DUF4413) 410 490 IPR025525 GO:0003677
Tsu04g03830 667 Pfam hAT family C-terminal dimerisation region 547 627 IPR008906 GO:0046983
Tsu04g03830 667 SUPERFAMILY Ribonuclease H-like 175 629 IPR012337 -
Tsu04g03830 667 SMART bed5 37 84 - -
Tsu04g03830 667 Pfam BED zinc finger 41 82 IPR003656 GO:0003677
Tsu04g03830 667 PANTHER BED ZINC FINGER AND HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 22 637 - -
Tsu04g03830 667 PANTHER BED FINGER-RELATED 22 637 IPR045259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03830 Tsu-Chr4 47169510 47172519 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03830 - - ahf:112708868 1070.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03830 04 47169510 47172519 Tsu04g03830 04 47169510 47172519 ECH