Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03822 ATGCCTGTTTCAACTCGATCTAAAATCACTACACAAAATGACTTAAATCATCCATCAATGCAAAATCCTCACCATGGCCTCAAagaaaaactcaaaaccctCACTCTCTTATatgaacaacaaaaacaagCTTCTAAATCTCTCACCGCCATGCGTGACAGAAACTCAATCCCAACAAACTCATCAACCGTTACAAAAACCTTCGTCTTACCTCAACCACCTTCATCGATCAACGACGACACCAAAGAAAATCATAATCTCATCGCTGGATCAGATCGAATTGTCGGATTTTCATATCCAAGAAAGgttccaacaacaacaacagcagaTTCAGTTCCGGCttcgaatttgaatttgaattcgaGAAATTCGAATTCTACCGCCTTTGCTCGGAGACTGTCGATGCCGGCGGCGACGGGGAAGGGGAAAGAGGAAGAGTTAGGAAAATGTGTGAGCAGGATTATGGTGTTTGTTAGGGTTAGGCCGATGaacaaaaaggaaaaggaatTGAGTTCACGGTGCTGTGTGAGAATCGTTAATAACCGTGACGTTTATCTAACGGAGTTTGCGAATGAAAATGATTATCTCAGACTTAATAGGGTTAAGGGACGACATTTTACTTTTGATGGTTCTTTTACTGATTCAGCAACTCAGGAACAAGTTTATTCCACCACAACCTCGGAACTTGTGGAAGCGGTTCTGCAGGGGAGGAATGGATCGGTTTTCTGTTATGGTGCCACGGGAGCTGGAAAAACCTATACAATGCTTGGTACTGTGGAGAATCCAGGGGTGATGGTTTTGGCTATTAAGGATCTTTTCAGTAAAATCAGGCAGAGAAGTTGTGATGGAAGCCACGTGGTACATCTTTCCTATCTTGAGGTTTACAATGAAACTGTCAGAGATTTGATTTGCCCTGGAAGGCCTTTAGTCCTTAGAGAAGATAAACAGGGGATTGTGGCAGCTGGTCTTACACAATATAGAGCTTCTTCTGCAGATGAGGTGATGGCATTGCTTCAACAAGGAAATCGGAGCCGAACCACAGAACCAACTCGTGCAAATGAAACATCTTCACGTTCCCATGCAATTTTGCAGGTTGTGGTTGAATACCGAGTTAGAGATGCTACAACAATGAATATTGTTAACCGGGTGGGCAAACTCTCATTAATTGATCTTGCAGGGTCAGAGAGAGCTCTTGCTACGGATCAAAGAACACTTAGATCTCTTGAGGGTGCCAATATAAACCGGTCCCTTCTAGCACTCAGCAGCTGCATCAATGCTCTTGTAGAAGGCAAGAAACACATACCGTATCGAAATTCAAAACTCACTCAACTTCTCAAGGATTCACTAGGAGGAACTTGCAATACTGTCATGATTGCAAACATAAGTCCAAGTAGCCTCTCATTTGGCGAAACTCAGAACACCGTCCATTGGGCCGATAGAGCCAAAGAGATTCGGCTAAAGGTGAGCGATACCAATGAGGACCAATTGCCAATGCCTGAGACAGAATCAGACCAGGCCAAGCTGGTACTTGAACTACAAAAGGAGAATCGTGAAATAAGAATGCAGCTAGCACGACAACAACAGAAGCTCTTGACTCTAGAAGCACAGTCTTTAGCTTCACATTCTTCTACAACCCCACCACCTTCTACTGCAAATCTATCTACTACTCCAACTTCTGCCCAACCAAGTGAAAGACGAAGGACTAGATCCTCTTTCTTGGCTGGAACTTGTTTCACTCCGGAAACCAAGAAGAAAGGAGCTGAGTTAGCTGTGAGGACACTACAACGGACAGTGAAAGCACTAGAGGCTGAGATAGAGAGAATGAAGAAAGATCATAACTTGCAGCTAAAACAGAAAGATGATGTCATTCGCGAGCTTACTCGAAAGTGTGGAAAACAAGCATTAACAAATGGTGAAGTGGGGAAGAGAGTGGTAACCGGAGCTGCTAGCCTACAAGAAAAGGAGCCAAAGGATGGTGAATTGAAGAGTCATCATCGTCTTCGATCACCGGCTCCAACTGCGAAAAAACGAAGCTTTTGGGACATAACCACAAATAGCAGTCCATCAGTTACTACGTTAAATGGTAGAAAAACTAGAAGCCATGTCCTTTCAGAGCATACAGCACCTCCTCCATCAATGCTTCTTCAGCCTGGTTTTGCTCGTCAAAAGGCCAATGGTTAG 2181 0.4214 MPVSTRSKITTQNDLNHPSMQNPHHGLKEKLKTLTLLYEQQKQASKSLTAMRDRNSIPTNSSTVTKTFVLPQPPSSINDDTKENHNLIAGSDRIVGFSYPRKVPTTTTADSVPASNLNLNSRNSNSTAFARRLSMPAATGKGKEEELGKCVSRIMVFVRVRPMNKKEKELSSRCCVRIVNNRDVYLTEFANENDYLRLNRVKGRHFTFDGSFTDSATQEQVYSTTTSELVEAVLQGRNGSVFCYGATGAGKTYTMLGTVENPGVMVLAIKDLFSKIRQRSCDGSHVVHLSYLEVYNETVRDLICPGRPLVLREDKQGIVAAGLTQYRASSADEVMALLQQGNRSRTTEPTRANETSSRSHAILQVVVEYRVRDATTMNIVNRVGKLSLIDLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGTCNTVMIANISPSSLSFGETQNTVHWADRAKEIRLKVSDTNEDQLPMPETESDQAKLVLELQKENREIRMQLARQQQKLLTLEAQSLASHSSTTPPPSTANLSTTPTSAQPSERRRTRSSFLAGTCFTPETKKKGAELAVRTLQRTVKALEAEIERMKKDHNLQLKQKDDVIRELTRKCGKQALTNGEVGKRVVTGAASLQEKEPKDGELKSHHRLRSPAPTAKKRSFWDITTNSSPSVTTLNGRKTRSHVLSEHTAPPPSMLLQPGFARQKANG 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03822 726 MobiDBLite consensus disorder prediction 651 726 - -
Tsu04g03822 726 MobiDBLite consensus disorder prediction 678 698 - -
Tsu04g03822 726 Gene3D Kinesin motor domain 150 535 IPR036961 -
Tsu04g03822 726 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 528 IPR027417 -
Tsu04g03822 726 MobiDBLite consensus disorder prediction 1 25 - -
Tsu04g03822 726 PANTHER KINESIN-LIKE PROTEIN 145 719 - -
Tsu04g03822 726 Coils Coil 584 629 - -
Tsu04g03822 726 MobiDBLite consensus disorder prediction 1 20 - -
Tsu04g03822 726 ProSiteProfiles Kinesin motor domain profile. 153 484 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03822 726 MobiDBLite consensus disorder prediction 653 667 - -
Tsu04g03822 726 MobiDBLite consensus disorder prediction 537 573 - -
Tsu04g03822 726 PRINTS Kinesin heavy chain signature 236 257 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03822 726 PRINTS Kinesin heavy chain signature 350 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03822 726 PRINTS Kinesin heavy chain signature 385 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03822 726 PRINTS Kinesin heavy chain signature 434 455 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03822 726 PANTHER KINESIN-RELATED 145 719 IPR027640 GO:0003777|GO:0007018
Tsu04g03822 726 Coils Coil 509 536 - -
Tsu04g03822 726 SMART kinesin_4 151 492 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03822 726 Pfam Kinesin motor domain 159 484 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g03822 726 MobiDBLite consensus disorder prediction 46 82 - -
Tsu04g03822 726 ProSitePatterns Kinesin motor domain signature. 384 395 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03822 Tsu-Chr4 47088701 47092637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03822 154 489 Miscellaneous Gene Families AT2G21380 36.686 2.11e-55 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03822 K10401 - gmx:100798358 1048.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03822 04 47088701 47092637 Tsu04g03822 04 47088701 47092637 ECH