Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03819 ATGGATTCCGACGAAGAAGATTTTGTTTTCTTCGGAACGCCGATTGAGCGTGAGGAAGATTCAATCAGCCGCAAAAAGAAAGCCATTGCTGAATCCTCCGGTCAACTCCGAACACTTCCTGCTTGGAAGCAAGAGGTTAGAGATGATGAAGGGAGGAGAAGATTTCACGGTGCGTTTACTGGAGGTTATTCGGCTGGTTACTATAATACAGTGGGTTCAAAGGAAGGGTGGGCACCGCAGACTTTTGTATCGTCCAGGAAGAGTAGAGCTGAATTCAAAGAGCAGAACATATTGAATTTTCTAGATGACGATGAGAAAGCTGATCTGGAAGGTCGGTTTTTGGGGACATCTTCACAGTTTGACACATTTGGTTCCACAGCTGCTGAAATTGCTCGCAAACAAGCTGAGAAGGAACAAAAACAGAGGCCATCCATAATTCCTGGACCTGCTCCCGACGAATTGGTTATTCCAGCCACAGAGTCTATAGGGGTAAAACTGCTGATGAAGATGGGATGGAGTTGTGGTCGCTCAATTAAGGATTCACATACTGATGCACTCTACGATGCTAGAAGACAGGCTCGGAGAGCTTTCATAGCATTTTCTACAGATGATACAAAAGTGAAGGTTACCGAGTCTGAGCATACCAAGGATGATATTCAAAACTTCCCTGAGCAGCCTGTGAATGATGATGCTCAGTCTTCTAAGATAACACCGGTTTACGTACTCAACCCAAAGCAAGACCTGTATGGATTAGGTTTTGACCCTTATAAGCACGCTCCTGAGTTTAGAGATATGAAAAGGTCACGCCTATCCAGCAAAACGGGACCTGGGCACAGCAAAAACTTTTCCACAAGAGACAGTCTTTTTGGTTTGAAGTCAGGAAAGGCTGCTCCTGGTTTTGGCATTGGTGCACTTGAGGAACTTGATGCTGAAGATGAGGATGTCTATGCCACTGgtTATGAATTTGAAGAGGCTTATGTTCAAGAGGAGGACGAGGAGCCTTCAGTGTTGACCCTAGAAAAACCGAAAAAGAAAGATCAGAAGGAGCATGGTAATCTGCCTGGTTTTAGAGTGACATCCAATTCTGACTATAAAATGGAAAGATTTGAAGCTCCTCTGGTTCCCAAGGATTTTGTGCCCCACCATGCATTTTCTGGACCTCGTGAGATTAACCGCCAGAACTATGAGGTCCCTCCACCAGACGTTCCTCCTCCTGAGGATAGCAATTTAAAACTATTAATTGAGGGGGTTGCAAATCTGGTAGCTAAATGTGGTAAATTATACGAGGATCTATCTAGAGAAAAAAACCGGTCAAATCAATTGTTTAACTTCCTTTCTGGAGGAACTGGCCACGATTATTATGCAAGGAAACTGTGGGAGGCACAACAGAAATGCAATGACCAAACTAGGGTGCAGTTGGATGGAAAAATGCCTCCTGGTGTGCAAAAGCTGACAGCTGAGAGTCGAGGTCAGATCTTAGGGGAAAAACCTCTAGAGAAAACCTTTGAAGATCCATCCTCATCTGTTTCTTCTAAAGATATTCAGCTCCAATATAATCTTGTAGATACATTTACCAAGTCTGCATCATTTAGTGAGTTATCAGAATTTGAAAAGCCTTTCAAGGATGATCCTGCAAAGCAAGAAAGGTTTGAGCAGTTTATCAAGGCGAAGTATAAAGGTGGATTACGCTCTGGAAGTTCGAGTTTAGCTGGAAATATGTCAGAAGCTGCTCGTGCTCAAGAGAGACTATCTTTTGAAGCTGCAGCTGATGCAATAGAAAAGCGAAAACAGAGCAGGGGAAGCAAGTTTTCAACTCCATCTACCATGGATTTCATCCCAGGTGGTGTAATGGAGTTTACATCTGGTGCAGTAGAGCCAACAAAAGACCAGCCAGTTGTAGATTTTAAGGAGAAGAAATTGTACCCAAAGAGAGAAGAGTTTCAATGGCGTCCTTCACCTCTTCTCTGCAAACGCTTCGATCTTGTTGATCCTTATATGGGGAAGCCTGCACCTGCTCCACGGATTAGGAGTAAGATGGATACGTTGATTTTTACTTCAGATTCAGTGAAGGGTACTAAAGTGGAGGAGCCTGTGACTTCAAAGAAAGATATCCCAGTCTTGCAACAATCTGCTAATAAAGACATAATTAAAAGTATCGCTGAAAATGAAACTGAAGAGGAAGTGGAAGTTGAAAATATTGAAAGGCCAGTTGACCTATACAAGGCTATTTTCTCTGATGATTCAGATGATGAAGTGGAAGACAATAATATTATGAAAGTGGAGAATCAAGACAAAAAAGCTGAAGTAGCTAACACAGCATTGAGCCGTTTGATTGCTGGTGACTTTCTGGAATCTTTGGGAAAGGAGCTAGGGATTGAGGTTCCTCCTGATACACCTTACCCTACGCAAAAGTCAGGCAAAGATGCTCCCCAGAGAGATAATGTTAATGAATATGCAAAACCTGACATCATGAATGGTGAAAACGTGGTGTCATTGAAACATGATTTGCCACAGGATCAGTACATTGCTCATGAGGGTGGACCCTCCAAAGATGACACCAGTTATGGACATATGCCTGATAATCGTAACATTAAAACCAAGGGAACTAGTATCACTGATGGtaaatcaaaatcaagcaaGTCTAATGGGGAGAAGTATGAAGATGATAGGAAAGTTAAATCACCTTTAGTCAGCAACCAAGACCATCGCAGCAGCTCAGAGGAGGAAAGGAGCAGAAAGCGCTCTAGTAAGTTAAATAGGGAAAAATATGACGGGTACAAGAAACCTAAAACACCGTCAACACACCGCCTAGATTATAGAAGTAGTTCTTCATCGGAAGAGGATGGGAGCAGAAAACGCTCCAGGCATCATCGACATAGGAGGCGTGATGTAGGAAGTGATTCATCCAGTGACGATGAAAGAGATCGACGCAGTTCAAGGTCAAAAGGGAGACGGGAAAAGTCTTCTCGAGAAAAAAGCAATGGAAGTAAGAAACACTCAAAAACTCACAAGCACGGAAAACATGAATCTCCAAGTAGATCCTCTCATTATAGGATGGATAAGGAGGATTCATATTCCAGAAAAGAGAAAAGACGGAGAGAATGA 3105 0.4264 MDSDEEDFVFFGTPIEREEDSISRKKKAIAESSGQLRTLPAWKQEVRDDEGRRRFHGAFTGGYSAGYYNTVGSKEGWAPQTFVSSRKSRAEFKEQNILNFLDDDEKADLEGRFLGTSSQFDTFGSTAAEIARKQAEKEQKQRPSIIPGPAPDELVIPATESIGVKLLMKMGWSCGRSIKDSHTDALYDARRQARRAFIAFSTDDTKVKVTESEHTKDDIQNFPEQPVNDDAQSSKITPVYVLNPKQDLYGLGFDPYKHAPEFRDMKRSRLSSKTGPGHSKNFSTRDSLFGLKSGKAAPGFGIGALEELDAEDEDVYATGYEFEEAYVQEEDEEPSVLTLEKPKKKDQKEHGNLPGFRVTSNSDYKMERFEAPLVPKDFVPHHAFSGPREINRQNYEVPPPDVPPPEDSNLKLLIEGVANLVAKCGKLYEDLSREKNRSNQLFNFLSGGTGHDYYARKLWEAQQKCNDQTRVQLDGKMPPGVQKLTAESRGQILGEKPLEKTFEDPSSSVSSKDIQLQYNLVDTFTKSASFSELSEFEKPFKDDPAKQERFEQFIKAKYKGGLRSGSSSLAGNMSEAARAQERLSFEAAADAIEKRKQSRGSKFSTPSTMDFIPGGVMEFTSGAVEPTKDQPVVDFKEKKLYPKREEFQWRPSPLLCKRFDLVDPYMGKPAPAPRIRSKMDTLIFTSDSVKGTKVEEPVTSKKDIPVLQQSANKDIIKSIAENETEEEVEVENIERPVDLYKAIFSDDSDDEVEDNNIMKVENQDKKAEVANTALSRLIAGDFLESLGKELGIEVPPDTPYPTQKSGKDAPQRDNVNEYAKPDIMNGENVVSLKHDLPQDQYIAHEGGPSKDDTSYGHMPDNRNIKTKGTSITDGKSKSSKSNGEKYEDDRKVKSPLVSNQDHRSSSEEERSRKRSSKLNREKYDGYKKPKTPSTHRLDYRSSSSSEEDGSRKRSRHHRHRRRDVGSDSSSDDERDRRSSRSKGRREKSSREKSNGSKKHSKTHKHGKHESPSRSSHYRMDKEDSYSRKEKRRRE 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03819 1034 Gene3D Surp module 367 467 IPR035967 GO:0003723|GO:0006396
Tsu04g03819 1034 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 1 928 - -
Tsu04g03819 1034 MobiDBLite consensus disorder prediction 963 995 - -
Tsu04g03819 1034 MobiDBLite consensus disorder prediction 859 877 - -
Tsu04g03819 1034 MobiDBLite consensus disorder prediction 878 952 - -
Tsu04g03819 1034 PANTHER BNACNNG56020D PROTEIN 1 928 - -
Tsu04g03819 1034 MobiDBLite consensus disorder prediction 1012 1034 - -
Tsu04g03819 1034 Pfam Surp module 413 460 IPR000061 GO:0003723|GO:0006396
Tsu04g03819 1034 MobiDBLite consensus disorder prediction 996 1011 - -
Tsu04g03819 1034 ProSiteProfiles SURP motif repeat profile. 413 457 IPR000061 GO:0003723|GO:0006396
Tsu04g03819 1034 SMART surpneu2 411 463 IPR000061 GO:0003723|GO:0006396
Tsu04g03819 1034 MobiDBLite consensus disorder prediction 790 1034 - -
Tsu04g03819 1034 MobiDBLite consensus disorder prediction 340 359 - -
Tsu04g03819 1034 SUPERFAMILY Surp module (SWAP domain) 395 463 IPR035967 GO:0003723|GO:0006396
Tsu04g03819 1034 Pfam Protein of unknown function (DUF1604) 39 116 IPR011666 GO:0006397
Tsu04g03819 1034 MobiDBLite consensus disorder prediction 211 231 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03819 K13123 - gmx:100796934 1385.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03819 04 47068208 47077662 Tsu04g03819 04 47068208 47077662 ECH