Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03812 ATGTTCCGTTTCCGCATAAGCAACACCGTTGTAGGTGCACTCAACATACTCTCTTTACTCCTTGGTCTCGCCGCAATCGGTTCCTCTGCATACATCCACATCCGCGGTGGTTCCGATTGTCAAAAGGTGCTTCAATATCCCCTCTTAATCGGCGGTATATTTGTCGTGATTGTGTCGGGACTAGGAATCGCAGGATCGCTGTACGCCATTAACACGGCGCTCTACACTTACCTTTTGGTGACATTCTTGGTTGTGATTGGACTCGCTTTCTTCACGGTGTTCGCGGTGTTTGTCACGAATAGAGGAGTGGGGAAACAAATTTCTGGTAAAGGGTATGGTGAGTATAGAGTTGGTGATTTCTCTCATTGGTTGCAACGATATGTTGTGAATGAAGAGAATTGGGATGAGTTCAAGAGTTGTTTGATGGATGCTCGTGTTTGTCAGAATCTCGCCATCAATGGTGGTCGGAATAATGACTCTCTCATTTTCAAACACTTGTCTACCACTCAGGCCGGGTGCTGTAAGCCACCGGTGTATTGTGGATTTACGATGAAGAATGCAACATTTTGGGAAGTACCGAAATCCGGTTTGGCAGCGAATAATTCAGATTGTGCGACGTGGAATAATAGGCAGGACAAATTGTGCTATGATTGCAATTCATGCAAAGGAGGAGTATTGGCTAACATAAGGAACCAATGGAGACATTTAACTGTGTTCAATGGTTTTATGCTTGTTCTTGTCACTGCCATTTACGCCATGGGATGCTATGCTATCAGAAACAACCGATTGGACTCGCGCATCGTTAACCCTTAA 813 0.4502 MFRFRISNTVVGALNILSLLLGLAAIGSSAYIHIRGGSDCQKVLQYPLLIGGIFVVIVSGLGIAGSLYAINTALYTYLLVTFLVVIGLAFFTVFAVFVTNRGVGKQISGKGYGEYRVGDFSHWLQRYVVNEENWDEFKSCLMDARVCQNLAINGGRNNDSLIFKHLSTTQAGCCKPPVYCGFTMKNATFWEVPKSGLAANNSDCATWNNRQDKLCYDCNSCKGGVLANIRNQWRHLTVFNGFMLVLVTAIYAMGCYAIRNNRLDSRIVNP 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03812 270 PANTHER TETRASPANIN-8 4 264 - -
Tsu04g03812 270 Pfam Tetraspanin family 8 253 IPR018499 GO:0016021
Tsu04g03812 270 PANTHER TETRASPANIN-8-RELATED 4 264 IPR044991 GO:0009734|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03812 Tsu-Chr4 47012243 47013149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03812 4 262 Miscellaneous Gene Families AT1G18520 45.660 5.69e-79 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03812 - - gmx:100815322 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03812 04 47012243 47013149 Tsu04g03812 04 47012243 47013149 ECH