Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03803 ATGTTGAACATAAAAAATACTATGGTCATGGTTGTCACTGCCATTATTGCTATGTTTCTACTGTGTTCTCCATCATCAGTAGCTATATTACTGAACAAGCTTCCGCTACCAGCGCCACTGACAGGACCTGAGTCTCTGGCATTTGATAGAAACGGTGGAGGACCTTATGTTACTTCTTCTGATGGAAGAATTTTCAAATATGTAGGTCCAAATGAAGGATTCAGGGAATATGCTTACACTACTCCCAACAGgAACAGAACAATCTGTGATGGACTTGCTGACTTCTCAGTAGTTCAAGCAATATGTGGAAGGTCTTTAGGATTGGGTTTCAATCATCAGACAGGCGATTTGTATGCAGCTGATGCTTATCTTGGACTTGTTAAGATTGGTCCCAATGGTGGTGGGAATGTAACCCAATTAAGTGCACCTGCACAAGGCAATTCTACTAGATTTGCCGATGGTTTGGATGTAGACCCAGACACTGGAATCGTTTATTATACCATAGCTAGCACTAATTACCAGCTCAAAGATTTCCAAACGGTGGTAAGCAGTGGCAGTGGAGATAGTTCAGGAAGCCTATTGAGATATGATCCAAGCACCAACCAAACAACGGTGTTGCTAAGCAATCTTACAATACCATCTGGGGTGGCAGTTAGCGCAAATGGCTCATTTGTACTTGTTAGTGAATATCTAGCAAATAGAATTCAGAGAGTGTGGCTAAAAGGACCAAGAGCAAATTCATCAGAAATATTCCTGCAACTTGCTGGAAGACCAGATAATATCAAGAGGAATTCAAGAGGCCAATTTTGGATTTCTGTGAATAGTTTTTTAGGATCGCCAAGATCTCCAGGATGTTCTACTTTGCCTTCAGGTGTTAGAGTGACGGAGAATGGTTTCATTTTACAAATTGTATCTCTTGCTGAAGAGTATGGTGCTGAAGCAGCTAGTGAGGTTCAAGAGTACAATGGAACACTCTATGGTGGCTCCCTGCTTGCTTCTTATGCTACCATTTTTACTCCCTGA 1023 0.4154 MLNIKNTMVMVVTAIIAMFLLCSPSSVAILLNKLPLPAPLTGPESLAFDRNGGGPYVTSSDGRIFKYVGPNEGFREYAYTTPNRNRTICDGLADFSVVQAICGRSLGLGFNHQTGDLYAADAYLGLVKIGPNGGGNVTQLSAPAQGNSTRFADGLDVDPDTGIVYYTIASTNYQLKDFQTVVSSGSGDSSGSLLRYDPSTNQTTVLLSNLTIPSGVAVSANGSFVLVSEYLANRIQRVWLKGPRANSSEIFLQLAGRPDNIKRNSRGQFWISVNSFLGSPRSPGCSTLPSGVRVTENGFILQIVSLAEEYGAEAASEVQEYNGTLYGGSLLASYATIFTP 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03803 340 Pfam Strictosidine synthase-like, N-terminal 33 66 - -
Tsu04g03803 340 Gene3D - 25 339 IPR011042 -
Tsu04g03803 340 PANTHER STRICTOSIDINE SYNTHASE-RELATED 8 338 - -
Tsu04g03803 340 SUPERFAMILY Calcium-dependent phosphotriesterase 17 275 - -
Tsu04g03803 340 Pfam Strictosidine synthase 153 243 IPR018119 GO:0009058|GO:0016844
Tsu04g03803 340 PANTHER SMP-30/GLUCONOLACONASE/LRE-LIKE REGION PROTEIN 8 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03803 Tsu-Chr4 46940253 46941778 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03803 - K01757 mtr:MTR_4g112620 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03803 04 46940253 46941778 Tsu04g03803 04 46940253 46941778 ECH