Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03802 ATGGCTATGGTTGTGATCACAGCAACTCTTTTGATTTTCCTCTTGTGCTCTCCAACTCCATCAGTAGCTATATTACTGAACAAGCTTCAGCTACCATCACCGGTGACCGGACCCGAGTCACTTGCCTTTGATAGAAACGGCGGAGGACCATATGTTAGTTCTTCAGATGGAAGAATTTTCAAATATGTTGGTCCAAATGAAGGATTCAAAGAATATGCTTCCACTTCTCCAAACAGGAACAAGACAGTCTGTGATGGGCTTGCAGACTTCTCAGCACTACAGGCAACATGTGGAAGGCCTTTAGGATTGGGTTTCAATCATCAGACTGGCGATTTGTATGCAGCTGATGCTTATCTTGGACTTGTTAAGGTTTCTCCAGATGGAGGAAATGTAACTCAATTATTTGGACCTGCACAAGGCAATTCTACTAGGTTTACTGATGGTTTGGATGTAGATCCCGACACTGGAATCGTTTATTTTACCGAAGCTAGCACTAACTTCCAGCTCAAagatttccAATCACTGGTTAACAGTGATGATAATTCAGGAAGCCTATTGAAATATGATCCAAGCACCAACCAAACGACGGTGTTGCTAAGAAATCTTTCAGTGCCATCTGGTGTGGCTGTAAGCAGAGATGGATCATTTGTACTTGTTAGTGAATATCTAGCAAACAGAATTCAGAGAGTATGGCTGAAAGGACCACGAGCAAATTCGTCAGAACTATTCATGATACTTCTTGGAAGACCAGATAACATCAAGAGAACTTCAAGAGGACAGTTTTGGATTTCAGTGAATAGTTTTATTGGGTCACCAATATCTCCAAGACGCGCGACTTTGCCTCGGGGAGTTCTAGTAACTGAGAATGGTATAGTTTTACGGGTTGTGTCTCTTGCATCGGAGTATGGTGCTGAAGCAGCTAGTGAGGTTCAAGAGTACAATGGAACACTCTATGCCGGCTCTCTACTCGCTTCTTATGCTGCCATTTTTACTACTCCCTAG 1002 0.4251 MAMVVITATLLIFLLCSPTPSVAILLNKLQLPSPVTGPESLAFDRNGGGPYVSSSDGRIFKYVGPNEGFKEYASTSPNRNKTVCDGLADFSALQATCGRPLGLGFNHQTGDLYAADAYLGLVKVSPDGGNVTQLFGPAQGNSTRFTDGLDVDPDTGIVYFTEASTNFQLKDFQSLVNSDDNSGSLLKYDPSTNQTTVLLRNLSVPSGVAVSRDGSFVLVSEYLANRIQRVWLKGPRANSSELFMILLGRPDNIKRTSRGQFWISVNSFIGSPISPRRATLPRGVLVTENGIVLRVVSLASEYGAEAASEVQEYNGTLYAGSLLASYAAIFTTP 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03802 333 SUPERFAMILY Calcium-dependent phosphotriesterase 28 321 - -
Tsu04g03802 333 Pfam Strictosidine synthase 147 235 IPR018119 GO:0009058|GO:0016844
Tsu04g03802 333 Gene3D - 20 332 IPR011042 -
Tsu04g03802 333 PANTHER SMP-30/GLUCONOLACONASE/LRE-LIKE REGION PROTEIN 3 330 - -
Tsu04g03802 333 PANTHER STRICTOSIDINE SYNTHASE-RELATED 3 330 - -
Tsu04g03802 333 Pfam Strictosidine synthase-like, N-terminal 29 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03802 Tsu-Chr4 46936222 46937480 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03802 - K01757 lja:Lj0g3v0322739.1 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03802 04 46936222 46937480 Tsu04g03802 04 46936222 46937480 ECH