Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03801 ATGTTGAATATGGCTATGGTTGTGATCACAGCAACTCTTTTGATATTCCTCTTGTGCTCTCCATCATCAGTAGCTATATTACTGAACAAGCTTCAGCTACCATCACCAGTGACGGGACCCGAGTCACTTGCATTTGATAGAAACGGCGGAGGACCATATGTTAGTTCTTCAGATGGAAGAATTTTCAAATATGTTGGTCCAAATGAAGGATTCAAAGAATATGCTTCCACTTCTCCAAACAGgaACAAGACAGTCTGTGATGGGCTTGCAGACTTCTCAGCACTACAGGCAACATGTGGGAGGCCTTTAGGATTGGGGTTCAATCATCAGACAGGCGATTTGTATGTAGCAGATGCTTATTTTGGACTTGTTAAGGTTTCACCAGATGGAGGAAATTTAACTCAATTAGTTGGACCTGCACAAGGCAATTCTACTAGGTTTACTAATGGTTTGGATGTTGATCCTGACACGGGAATCGTTTATTTTACCGAAGCTAGCACTAACTTCCAGCTCAAAGATTTCCAATCACTGGTAAACAGTGAAGATAATTCAGGAAGCCTATTGAAATATGATCCAAGCACCAACCAAACGACCGTGTTGTTAAGTAATCTTGCAGTGCCATCTGGTGTAGCAGTTAGCAGAGATGGATCATTTGTTCTTGTCAGTGAATATCTCTCGAACAGAATTCAGAGAGTGTGGCTAAAAGGGTCAAGAGCAAATTCATCAGAACTATTCATGCTACTTGCTGGTAGACCAGATAACATCAAAAGGAATTCAAGAGGACAATTTTGGATTTCAGTGAATAATTTTATAGGGTCACCGACATCTCCAAGACGTGCGACTTTGCCCGTAGGAGTCAGAGTGACTGAGAGTGGTATAATATTACATATTGTGTCTCTTGCATCTGAGTATGGTGCTGAAGCAGCTAGTGAGGTTCAAGAGTACAATGGAACATTCTATGCCGGCTCTCTACTTGCTTCTTATGCTACCATTTTTACTCCCTAG 1005 0.4149 MLNMAMVVITATLLIFLLCSPSSVAILLNKLQLPSPVTGPESLAFDRNGGGPYVSSSDGRIFKYVGPNEGFKEYASTSPNRNKTVCDGLADFSALQATCGRPLGLGFNHQTGDLYVADAYFGLVKVSPDGGNLTQLVGPAQGNSTRFTNGLDVDPDTGIVYFTEASTNFQLKDFQSLVNSEDNSGSLLKYDPSTNQTTVLLSNLAVPSGVAVSRDGSFVLVSEYLSNRIQRVWLKGSRANSSELFMLLAGRPDNIKRNSRGQFWISVNNFIGSPTSPRRATLPVGVRVTESGIILHIVSLASEYGAEAASEVQEYNGTFYAGSLLASYATIFTP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03801 334 PANTHER STRICTOSIDINE SYNTHASE-RELATED 6 332 - -
Tsu04g03801 334 Pfam Strictosidine synthase-like, N-terminal 31 63 - -
Tsu04g03801 334 SUPERFAMILY Calcium-dependent phosphotriesterase 29 269 - -
Tsu04g03801 334 Gene3D - 22 333 IPR011042 -
Tsu04g03801 334 PANTHER SMP-30/GLUCONOLACONASE/LRE-LIKE REGION PROTEIN 6 332 - -
Tsu04g03801 334 Pfam Strictosidine synthase 149 236 IPR018119 GO:0009058|GO:0016844
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03801 Tsu-Chr4 46931501 46932719 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03801 - K01757 lja:Lj0g3v0322739.1 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03801 04 46931501 46932719 Tsu04g03801 04 46931501 46932719 ECH