Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03794 ATGAATCTCCAAAACACACCTTCCTCTCATGGTTTTCACATGCCTGCTGAATGGGAACCTCACTCCCAGTGTTGGATGGGTTGGCCCGAACGCGCTGATAATTGGCGTGACGGTGCTGTTCATGCTCACCGTGTGTTTGCTAGAGTGGCGTCTGCGATCTCCAAATTCGAGAGAGTAACTGTTTGTGCTAGTTCCGTTCAATGGGAGAATGCACGGAATCAGTTACCCGATCATGTTAGAGTTGTTGAGATTAGTGCTAATGATTCTTGGTTTCGCGATATTGGACCTACCTTTGTTGTGAGAAGAGAAACATCGAAATTGGATGATGCGGATCATAAGATTGCCGGAATTGATTGGACCTTTAATAGTTGGGGAGgtttagaAGATGGATGTTACAATGATTGGAGTCTCGACACATTTATCTTGGAAGTTGAGAGGATTCCTAGATTTTCGCATTCTATGGTGCTTGAAGGTGGAAGCATTCATGTGGATGGAGAAGGAACATGTCTTACAACCGAAGAGTGTCTGTTGAACAAGAACAGGAATCCACATTTGAGTAAGAACCAAATAGAGGATGAACTTAAGGCATATCTTGGAGTCACAAAGGTTATATGGTTGCCTCGTGGATTATATGGTGATGATGATACAAACGGTCATATTGATAACATGTGCTGTTTTGTGAGGCCTGGTGTGGTTCTTTTGTCGTGGACTGATGATAAAACTGATCCTCAGTATGAAAGATCTGAAGAAGCATATTCTTTACTTTCAAGTGTAACTGATGCTAAGGgtagaaaaattgaaatcattAAACTCCATGTTCCCGATCCACTATACATGACGGAGAAAGAGGCTGCTGGGGTTTTTCAGGATGACGAGGCCAAACCAAGACTTCCTGGAACAAGGCTTGCTGCTTCATATGTAAACTTTTACATTGCAAACAGTGGTATCATTGCTCCACAATTTGGAGATAAAAAGTGGGATGATGAAGCTATCCGAGTTCTGTCTAAAGCCTTCCCTGATCATGAAGTTGTGGGAATTGAAGGTTCCAGGGAGATTGTTTTGTCGGGTGGAAATATACATTGCATCACTCAGCAACAACCAGTCTGA 1107 0.421 MNLQNTPSSHGFHMPAEWEPHSQCWMGWPERADNWRDGAVHAHRVFARVASAISKFERVTVCASSVQWENARNQLPDHVRVVEISANDSWFRDIGPTFVVRRETSKLDDADHKIAGIDWTFNSWGGLEDGCYNDWSLDTFILEVERIPRFSHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLSKNQIEDELKAYLGVTKVIWLPRGLYGDDDTNGHIDNMCCFVRPGVVLLSWTDDKTDPQYERSEEAYSLLSSVTDAKGRKIEIIKLHVPDPLYMTEKEAAGVFQDDEAKPRLPGTRLAASYVNFYIANSGIIAPQFGDKKWDDEAIRVLSKAFPDHEVVGIEGSREIVLSGGNIHCITQQQPV 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03794 368 SUPERFAMILY Pentein 3 367 - -
Tsu04g03794 368 TIGRFAM agmatine_aguA: agmatine deiminase 6 367 IPR017754 GO:0009446|GO:0047632
Tsu04g03794 368 Hamap Agmatine deiminase [aguA]. 5 368 IPR017754 GO:0009446|GO:0047632
Tsu04g03794 368 Pfam Porphyromonas-type peptidyl-arginine deiminase 13 367 IPR007466 GO:0004668|GO:0009446
Tsu04g03794 368 Gene3D - 2 368 - -
Tsu04g03794 368 PANTHER AGMATINE DEIMINASE 1 368 - -
Tsu04g03794 368 PANTHER AGMATINE DEIMINASE-RELATED 1 368 IPR007466 GO:0004668|GO:0009446
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03794 Tsu-Chr4 46865245 46870341 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03794 K10536 - gmx:100811750 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03794 04 46865245 46870341 Tsu04g03794 04 46865245 46870341 ECH