Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03783 ATGTGTAAGCCAGAGACTAACAATAATAAGTGGCAAGATTTAGGTTGGATGGGTTTGAAGGTACAAAAAGAGAAACTTGGTTCGGGTTCTGGTTCGGGTTCAGGAAGGAGTAGAATGAAACTATGGATGATTCGTGCTACTACATCGGTTTTATTGTGGACTTGTATTGTTCAATTAACAGCTATAAGTGATTTATGGGGTCCTAGAGTTCTTAAGGGTTGGCCTTCATGTTTCACTCATGATTCTGTTTCTAATTCTAGAGCTATGGATGTTCAGCTTCAATCTCTGCGTCCACCACTTCTTCCTCCTAAGAGAGTTTATAAAAACAACGGATATTTGATGGTTTCGTGCAATGGAGGATTGAATCAAATGAGAGCAGCGATATGTGACATGGTTGCCATTGCTAGATATTTAAATGTCACGCTTATAGTCCCTGAACTTGATAAAGCATCCTTTTGGGCTGATCCCAGCGAATTCCAAGACATTTTTGATGTGGATCATTTTATAACATCCTTGAGAGATGAGGTGCGCATATTGAAAGAGTTGCCTCCTAGACTCAAGCTGAAAGTGGAACGTGGTTTCCTTTACAGTATGCCACCCATTAGTTGGTCCGACATATCTTACTATAAGAACCAGATTTTACCCTTGATACAAAAGTACAAAGTTGTCCATTTAAATAGAACGGATGCTCGGCTGGCCAATAACGGTCTACCTCTTGAGATTCAGAAGCTGCGTTGCAGAGTTAATTTTAGTGCTCTGAGATTTACTTCTCAAATAGAGGAGTTGGGCAGAAAGGTGATCAGGCTTCTAAGGAAAAATGGTCCGTTTCTGGTCCTTCATCTGAGGTATGAGATGGACATGTTAGCATTTTCTGGCTGTACTCAAGGTTGTAACAGTGACGAGGTGGACGAGTTGACAAGAATGAGGTATGCCTATCCTtggtggaaagagaaaataattaattctgACTTGAAAAGAAGAGATGGTTTATGTCCTCTAACACCTGAGGAGACTGCCCTCACACTAAGGGCACTTGACATTGATCAGAACATTCAAATCTACATTGCAGCTGGGGAAATATATGGTGGAGAAAGGAGAACGTCAAGTCTTTCAAAGGAGTACCCAAAATTGGTCAGGAAAGAAACACTGTTGGAGCCATCCGACCTTCGTTACTTCCAAAACCATTCATCTCAAATGGCAGCATTGGATTATCTTGTTTCATTAGAGAGTGATATTTTTGTTCCCACATATGATGGAAATATGGCCAAAGTTGTTGCGGGCCATCGCAGATATCTTGGGTTCAAGAAGACAATTTTATTGAACCGAAAGCTCTTGGTTGGTTTAATAGATCAGTACTATGATGGAGTACTTAACTGGGACCAATTTTCTTCAGCCGTGAAGAAATCACACGCTCATCGCATGGGTAACCCTAGTAAAAGGTTGGTAATCCTTGACAAGCCCAAAGAAGAGGATTATTTCTATTCCAACCCAGAGGaatgtttagaaccatcaaatgATCTGTTGAGTAGTACGTGA 1536 0.3984 MCKPETNNNKWQDLGWMGLKVQKEKLGSGSGSGSGRSRMKLWMIRATTSVLLWTCIVQLTAISDLWGPRVLKGWPSCFTHDSVSNSRAMDVQLQSLRPPLLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKASFWADPSEFQDIFDVDHFITSLRDEVRILKELPPRLKLKVERGFLYSMPPISWSDISYYKNQILPLIQKYKVVHLNRTDARLANNGLPLEIQKLRCRVNFSALRFTSQIEELGRKVIRLLRKNGPFLVLHLRYEMDMLAFSGCTQGCNSDEVDELTRMRYAYPWWKEKIINSDLKRRDGLCPLTPEETALTLRALDIDQNIQIYIAAGEIYGGERRTSSLSKEYPKLVRKETLLEPSDLRYFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVAGHRRYLGFKKTILLNRKLLVGLIDQYYDGVLNWDQFSSAVKKSHAHRMGNPSKRLVILDKPKEEDYFYSNPEECLEPSNDLLSST 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03783 511 PIRSF UCP009360 17 498 IPR024709 -
Tsu04g03783 511 PANTHER OS02G0726500 PROTEIN-RELATED 30 506 - -
Tsu04g03783 511 CDD O-FucT_plant 112 437 IPR024709 -
Tsu04g03783 511 Pfam GDP-fucose protein O-fucosyltransferase 112 432 IPR019378 -
Tsu04g03783 511 PANTHER GDP-FUCOSE O-FUCOSYLTRANSFERASE-LIKE PROTEIN 30 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03783 Tsu-Chr4 46754873 46758581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03783 108 501 Miscellaneous Gene Families AT2G37980 49.747 4.02e-132 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03783 K23280 - gmx:100793244 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03783 04 46754873 46758581 Tsu04g03783 04 46754873 46758581 ECH