Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03782 ATGCAGTTATGGAACAAAGCTCGAAGCTTTGCGGAAGAAACCGCGAAACGATCACAAGAAGAAATTTCCACCGGTGCTCACAAATTCACCGAAATCATAGCTGAAACTACCAAGGAGATCGCTGCACAAGCTTCCATTCACTTGACCGAACCTTCATTCAACAAGGATGTCGATCTTCAAAATTTCGGCATAACCGATGAATTTAGGGAATTCGTCAGAGGAATCACCGTCACTACCTTCCGAGATTTCCCTCTTCAAgATGATACGGAATTGTCTGATGTTCCTGCAGTTTCAAATATTAGGCAGGATCTAACTGAGTGGCAGGAAAAACATGCCAATCTTGTTCTTTCTACTGTCAAGGAAATCTCAAAATTGAGGTATGAGCTGTGCCCACGTGTCATGAAAGAGAGGAAGTTTTGGAGAATATATTTTATACTTGTGAATAATCATATTGCACCCTATGAGAATCGGTACATGGAAGAGACTAAACTAAAATCATCCGAGAAAGTTAAAGGTCAAATGGCGATGAAACCGTTAGAAGTTGAATTAACCTCTAACCAAGAGGTTAAGGAAGTGAATAAAGAGACTAAAACATTAAATTCATCACGTCAGCAAGACTTGGATGCATTTCTTCTGGGAGATACAGGAAGCAGTGATGATGACCCAGATGACAACAGGGGTGGATTTGATGATGATCTAGACAAACTGGTAAAAAGTTCGGATGATGATAAAGAGAAAGCATAG 744 0.4019 MQLWNKARSFAEETAKRSQEEISTGAHKFTEIIAETTKEIAAQASIHLTEPSFNKDVDLQNFGITDEFREFVRGITVTTFRDFPLQDDTELSDVPAVSNIRQDLTEWQEKHANLVLSTVKEISKLRYELCPRVMKERKFWRIYFILVNNHIAPYENRYMEETKLKSSEKVKGQMAMKPLEVELTSNQEVKEVNKETKTLNSSRQQDLDAFLLGDTGSSDDDPDDNRGGFDDDLDKLVKSSDDDKEKA 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03782 247 MobiDBLite consensus disorder prediction 192 247 - -
Tsu04g03782 247 PANTHER BSD DOMAIN-CONTAINING PROTEIN 54 243 - -
Tsu04g03782 247 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 46 - -
Tsu04g03782 247 PANTHER BSD DOMAIN PROTEIN 1 46 - -
Tsu04g03782 247 SUPERFAMILY BSD domain-like 63 156 IPR035925 -
Tsu04g03782 247 Gene3D BSD domain 78 163 IPR035925 -
Tsu04g03782 247 PANTHER BSD DOMAIN PROTEIN 54 243 - -
Tsu04g03782 247 MobiDBLite consensus disorder prediction 219 247 - -
Tsu04g03782 247 SMART wurzfinal6 99 151 IPR005607 -
Tsu04g03782 247 Pfam BSD domain 106 151 IPR005607 -
Tsu04g03782 247 ProSiteProfiles BSD domain profile. 106 151 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03782 Tsu-Chr4 46740705 46745572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03782 3 222 EF-hand Containing Proteins AT1G69030 40.070 3.57e-57 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03782 - - mtr:MTR_4g110020 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03782 04 46740705 46745572 Tsu04g03782 04 46740705 46745572 ECH