Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03778 ATGGGTTGGGCAATAGCTCTACATGGCGGCGCCGGCGTCCCATATTCACTTCCACTGGAACGCCGTCAACCACGCGAAGAAGCCCTCCGTCACTGCCTCCAAATCGGTATCAAAGCTCTCAATTCCAAAATGACCTCTCTAGATGTCGTTGAACTTGTTGTTCGTGAGTTAGAGAACATTCCACACTTCAATGCAGGAAGAGGTTCTGTTCTCACCAACAAAGGCACGGTTGAAATGGAAGCTTCTATAATGGATGGTAAAACTATGAAATGTGGTGCTGTTTCTGGTCTTACTACTGTTTTTAATGCTGTTTCTTTGGCTCGTTTGGTAATGGAGAATACTCCTCACATTTATTTGGCATTTGATGGAGCTGAAGATTTTGCTAGACAACAAGGTGTTGAGACTGTAGATTCAAGCCATTTCATTACTCCAGAGAACATTGAAAGACTAAATCAGGCAAAAGATGCAAATAGGGTTCAGATTGATTATACCCAACCAATCCAAAATGATACTAAGAATGAAACAGAAACACCATTTGCTAATGGTGATAATCAAATGGGAACTGTTGGATGTGTAGCTGTTGATAGTAATGGGAATCTAGCTTCTGCAACATCAACTGGTGGATTAGTGAACAAAATGGTCGGTAGAATCGGCGACACGCCACTCATTGGTGCTGGAACATATGCCAATGAATTTTGTGCAGTTTCTGCAACAGGAGTAGGCGAAGAAATAATTCGCAGGACAGTGGCAAGAGATGTGGCTGCATTGGTGGAATTCAAAGGCCTTTCTCTGAAAGAAGCTGCTAATATTGTTGTACAAGAGCGCACACCAAAGGATACTGTTGGTTTGGTTGCTGTATCTGCTGCAGGAGAAGTTGCAATGCCTTATAATACAACAGGCATGTTTAGAGCTTGTGCTACTGAAGATGGGTATTCTGAGGTTGCAATTTGGTCAAATTCCATAATTTAA 969 0.4231 MGWAIALHGGAGVPYSLPLERRQPREEALRHCLQIGIKALNSKMTSLDVVELVVRELENIPHFNAGRGSVLTNKGTVEMEASIMDGKTMKCGAVSGLTTVFNAVSLARLVMENTPHIYLAFDGAEDFARQQGVETVDSSHFITPENIERLNQAKDANRVQIDYTQPIQNDTKNETETPFANGDNQMGTVGCVAVDSNGNLASATSTGGLVNKMVGRIGDTPLIGAGTYANEFCAVSATGVGEEIIRRTVARDVAALVEFKGLSLKEAANIVVQERTPKDTVGLVAVSAAGEVAMPYNTTGMFRACATEDGYSEVAIWSNSII 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03778 322 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 317 IPR029055 -
Tsu04g03778 322 CDD Asparaginase_2 4 310 - -
Tsu04g03778 322 PANTHER ISOASPARTYL PEPTIDASE/L-ASPARAGINASE 1 317 - -
Tsu04g03778 322 PANTHER L-ASPARAGINASE 1 317 IPR000246 GO:0016787
Tsu04g03778 322 Gene3D (Glycosyl)asparaginase 188 320 - -
Tsu04g03778 322 Pfam Asparaginase 3 317 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03778 Tsu-Chr4 46692879 46694764 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03778 5 295 Miscellaneous Gene Families AT4G00590 25.460 5.37e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03778 K13051 - gmx:100799400 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03778 04 46692879 46694764 Tsu04g03778 04 46692879 46694764 ECH