Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03777 atgcgaCGACGGGCTGCCGACTATCGGCGCCCGGTTAGACGGAGGTTATCTTATTGGATCTGCCTTCTCCTCTCTTTCTTCTTTATTCTCGCTTCTGTTTTATTCATCATTcaacataatcatcatcatcatcaagatCCGCTTCAATATTCTTTACTCGAGagaaatgcaagagttgaacatTTTGCCAAAGAAAGTTTGAATTTCACTGAAGAAATATTAAGTGTAACGTCATTTTCTCGGCAGTTAGCGCAACAAATGATTCTGGCAAAGGCTTATGTGGTTATTGCCAAAGAACACAATAATCTTCACCTTGCCTGGCAGCTTAGCTCAAAGATCAGAAGTTGCCAACTTTTGCTTTCAAAAGCTGCCATGACTGGGGAGCCTGTCACACTGGAAGAAGCAGAGCCAATTATTAAAAGCCTCACTGCTCTAATTTTTAAGGCACAAGATATCCATTATGACATTGCAACTACAATAGTGACTATGAAATCTCATATTCTTGCTCTTGAAGAGCGTGCCAATGCAGCAACAGTTCAAAGTGCCGTGTTTGGTCAACTAGCAGCTGAAGCGCTGCCCAAGAGTCTCCATTGTCTGAATGTGAAACTCGTGTCTGACTGGCTAAAGGTGCCATCTCTACAGGAACTCTCAGACGAGAGGAAAAACTCCCCAAGGCTCACAGACAACAACCTATATCATTTCTGCATATTTTCAGATAATGTACTGGCAACATCTGCAGTTGTTAACTCAACCGTCTACAATGCTGATCATCCGAAGCAGTTGGTCTTTCACATTGTCACCAATGGAATCAATTACGGAGCAATGCAAGCATGGTTCCTTAGTAATGACTTTAAAGGAGCCACCATAGAGGTACAGAACATTGAGGAGTTTCATTGGTTGAATGCATCTTATTCTCCAACCGTCAAGCAGCTCCAAAATCCTGACTCGCGAACTTTCTACTTTGGACTATATCAAGATGTAAGCGCTGATCCAAAAATGCGGAATCCTAAGTATTTGTATTTATTGAATCATCTCCGGTTTTATATCCCAGAGATTTATCCCCAACTTGAGAAGGTTGTTTTCCTGGATGACGATCTTGTTGTGCAGAAAGATCTGACCCCTCTTTTCTCACTGGATTTGCATGGGAATGTGAATGGTGCAGTTGAAACTTGTCTTGAAGCATTTCATCGGTACTACAAGTATCTaaacttctcaagttcaatTATAAGCTCAAGGTTTGATCCACAGGCATGCGCGTGGGCGTTTGGTATGAACGTTTTTGACTTGGTGGCATGGAGGAAGGCTAATGTGACCGCAAGATATCACTATTGGCAGGAGCAGAATGCTGATGGGACACTCTGGAAGCTGGGGACACTTCCTCCTGCTCTTCTGTGTTTTTATGGTTTGACAGAGCCACTTGACAGAAGATGGCATGTTCTAGGATTGGGCTATGACCTAAATATTGACAACCGCCTTATTGAAAGTGCGGCAGTTATTCACTTCAATGGGAACATGAAGCCGTGGCTGAAGGTAGCTATAGGCAGGTATAAGCCACTGTGGGACAAGTACATAAATCAAAGTCTCCCTCATCTTCAAAATTGTGTCCTGAGTTGA 1614 0.4126 MRRRAADYRRPVRRRLSYWICLLLSFFFILASVLFIIQHNHHHHQDPLQYSLLERNARVEHFAKESLNFTEEILSVTSFSRQLAQQMILAKAYVVIAKEHNNLHLAWQLSSKIRSCQLLLSKAAMTGEPVTLEEAEPIIKSLTALIFKAQDIHYDIATTIVTMKSHILALEERANAATVQSAVFGQLAAEALPKSLHCLNVKLVSDWLKVPSLQELSDERKNSPRLTDNNLYHFCIFSDNVLATSAVVNSTVYNADHPKQLVFHIVTNGINYGAMQAWFLSNDFKGATIEVQNIEEFHWLNASYSPTVKQLQNPDSRTFYFGLYQDVSADPKMRNPKYLYLLNHLRFYIPEIYPQLEKVVFLDDDLVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSSSIISSRFDPQACAWAFGMNVFDLVAWRKANVTARYHYWQEQNADGTLWKLGTLPPALLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKVAIGRYKPLWDKYINQSLPHLQNCVLS 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03777 537 CDD GT8_like_1 232 525 - -
Tsu04g03777 537 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 234 533 IPR029044 -
Tsu04g03777 537 PANTHER HEXOSYLTRANSFERASE 3 537 - -
Tsu04g03777 537 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 537 IPR029993 GO:0047262
Tsu04g03777 537 Pfam Glycosyl transferase family 8 236 510 IPR002495 GO:0016757
Tsu04g03777 537 SUPERFAMILY Nucleotide-diphospho-sugar transferases 232 535 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03777 Tsu-Chr4 46688237 46690710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03777 1 534 Glycosyltransferase AT2G20810 55.288 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03777 K13648 - gmx:100798878 989.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03777 04 46688237 46690710 Tsu04g03777 04 46688237 46690710 ECH