Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03775 atggttagGCCACGTTTCAAGTTACATAATTTGTGTATTGGTCATGTTGTCACACCTCGTGTTAGAGCTTGTtctacatcatcatcatcttcttttgGATCAAAATTTGCAAATAGAACTGAGTTTTCAAGCAATGGAGTTCAAGATTCTGGAAGAGATAACAAAGGTGATGAAAGTGGCAATAAAGTAATGGTGGTTGTGGATTCTAGCTTTGAAGCTAAAGGTGCTCTTGATTGGGCACTTTCACATACTATTCAGAAACAAGACACTGTTGTTCTTGTTCATGTAGCTAGACCCCTTAGAGAAGGTGGTGAGTCTGATGTGAAGTTTAATGTGAAGGCTTATCAACTTCTCTTAGATATGAAGAGTATGTGTGAAATGAAGAAACCTGGGGTGGTAGTGAATATAGTATTACTTGAAGGTGAAGAAAAGGGTGCTGCAATAGTGCAAGAAGCAAAGCAACAAAGGGTGTCTTTATTGGTGGTAGGACAAAGAAAACGTTCTATCTTGTGGTGCTTGATGAGGAAGTggacaagaaagagaagaacaaaaaatgGAGTTGCTGAGTATTGTATACAAAACTCACCTTGTATGACCATTGCAGTGAGAAGGAAGAATAAGAAACTTGGAGGGTATTTGATTACTACCAAACGCCATAAAAACTTTTGGCTTTTGGCATAA 681 0.3524 MVRPRFKLHNLCIGHVVTPRVRACSTSSSSSFGSKFANRTEFSSNGVQDSGRDNKGDESGNKVMVVVDSSFEAKGALDWALSHTIQKQDTVVLVHVARPLREGGESDVKFNVKAYQLLLDMKSMCEMKKPGVVVNIVLLEGEEKGAAIVQEAKQQRVSLLVVGQRKRSILWCLMRKWTRKRRTKNGVAEYCIQNSPCMTIAVRRKNKKLGGYLITTKRHKNFWLLA 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03775 226 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 61 206 - -
Tsu04g03775 226 CDD USP_Like 62 202 - -
Tsu04g03775 226 Pfam Universal stress protein family 62 203 IPR006016 -
Tsu04g03775 226 Gene3D HUPs 60 211 IPR014729 -
Tsu04g03775 226 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03775 Tsu-Chr4 46683059 46684534 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03775 50 168 Receptor kinase-like Gene Family AT1G17540 26.829 1.05e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03775 - - gmx:100527308 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03775 04 46683059 46684534 Tsu04g03775 04 46683059 46684534 ECH