Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03766 ATGCAGGGCTTAGTTCGGAGACTCACGGTGGTCACACGCCATCACTATCACCACCAACCTCAACCCAACCTCTCCTTCAATCCTCACCGTATCTCTCACACTCGTCCTTCAACTCACATCGCCCAACCTTCCAATCTAGGGCACCACATTccctcatcatcatcttccacCATTCATCTTTTTCACTCATGCCGCTCCCAAATTCGCTCCTCTTTCTCCCAATCAATCACCGTTCGAAACTATCTCTCCACTTTATTCGCCAAAAACTTACTTCATCGTACTCTTCCCAGAGTTCATTTTCACCGTCAGAACTTCAATTTCAACCACAATTTTAATTCTTACCGTCGTGGTTGGAGATCATGGTTCTACAGGCTAACACCGAATGACGTGGTTCTGGGCTTGATTGTAGCTAATGctgctatttttttattttggaggGTAGCAAGTGAAAAGTTTATGCTAAATAATTTTACCATCTCTTTGGACAATTTTAAGAGTGGACGCTTGCACACATTGATTACCAATGCATTCAGTCACGTAGATACCTGGCACTTAATTTCCAACATGGTTGGACTCTACTTCTTTGGAATGAATATTGCAAGTAAATTTGGACCTGAATTTCTGCTGAAGCTATATCTTGCTGGTGCAATTGGTGGTTCTGTTTTCTATCTGGTGCATCAAGCCTACAAGGCTCAAACGTCAAAGGGCTGGGGAGCTATCAGTGCTTCAAAAGAAGTAGCATTGGGAGCAAGTGGAGCTGTGAATGCAGTTATGCTTCTGGACATATTCCTCAATCCAAGAGCAACTTTATACTTGGACTTTATTATACCAGTTCCTGCGGCGTTGCTGGGAATTTTTTTGATCGGGAAAGATATGCTGAGGATATTAGAGGGAGACAAAACGATATCAGGATCTGCACATTTAGGGGGTGTTGCAGTTGCAGCCATAGCATGGGCAGGAGTTCGGAGAGGAAGATTCTAA 981 0.419 MQGLVRRLTVVTRHHYHHQPQPNLSFNPHRISHTRPSTHIAQPSNLGHHIPSSSSSTIHLFHSCRSQIRSSFSQSITVRNYLSTLFAKNLLHRTLPRVHFHRQNFNFNHNFNSYRRGWRSWFYRLTPNDVVLGLIVANAAIFLFWRVASEKFMLNNFTISLDNFKSGRLHTLITNAFSHVDTWHLISNMVGLYFFGMNIASKFGPEFLLKLYLAGAIGGSVFYLVHQAYKAQTSKGWGAISASKEVALGASGAVNAVMLLDIFLNPRATLYLDFIIPVPAALLGIFLIGKDMLRILEGDKTISGSAHLGGVAVAAIAWAGVRRGRF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03766 326 Pfam Rhomboid family 165 321 IPR022764 GO:0004252|GO:0016021
Tsu04g03766 326 SUPERFAMILY Rhomboid-like 129 323 IPR035952 -
Tsu04g03766 326 Gene3D - 128 319 IPR035952 -
Tsu04g03766 326 PANTHER RHOMBOID PROTEASE 8 319 - -
Tsu04g03766 326 PANTHER RHOMBOID-LIKE PROTEIN 12, MITOCHONDRIAL 8 319 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03766 - - gmx:100819148 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03766 04 46593813 46599551 Tsu04g03766 04 46593813 46599551 ECH