Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03756 ATGGCTATTTTTGTTACACAAGGTTATTTGGTAATTATTGGAATATTGGTTGCTTATTGGTTTACTATGTTGCCGGAATGGACAACATGGGCTATGCTTGTTTCTATGGCTTTGTATGATCTTGCTGCTGTTTTGTTACCTGTTGGGCCTTTGAGGCTTTTGGTTGAACTTGCAATATCAAGGGATGAAGAAATTCCGGCTTTGGTTTACGAGGCTAGGCCGGTTAGTAATGATAGTTTGGAACATGTTGCGGCTCGGAGGAGGTTATGGAGAGAGAGGAGGATTGAGAATTCAAATACGGTGGTAACTGAGAATGGAAGTTCCGTGTTGGGTAGTAGTGTACTTAATGTTGAACAATCACACTCCAATTCAGATGTGAACGTTGTTCTTGGTTCGAATCCGAACAGTAATGCCCCGGATGACGTGAATTTGGCTCCGGAAAATGCTTCGAATTTGAATTCTAGTAGCTCTTATGGTGCGTGTAATTTGGTACGAGCCGAAGAGGGGCGGGTGCAGGTTCGAGAAACTGATTCGGATCTTGTCACGCCTTTGATTGGTCGTGGACCGAATGTGCAGGTTCCTATAGGAGAAGATGCGGCATCGAATGAGAATTTGATGTTGGAGGGAATTGGATTGGCTTCGTCTGGTGCAATCAAGTTGGGGCTTGGTGATTTTATCTTCTATAGTGTTTTGGTTGGAAGGGCTGCAATGTATGATTTTATGACAGTTTATGCATGTTATCTTGCAATTATTGCTGGTCTCGGCATAACTTTGATGCTTTTGGCTTTGTATCAGAAAGCCTTGCCTGCTCTACCTGTGTCAATAGCACTCGGCGTGTTGTTTTATTTCTTGACCAGGTTTGAGCTTATGGTTTCATCTCTTGTTCTAGTCTGA 894 0.4306 MAIFVTQGYLVIIGILVAYWFTMLPEWTTWAMLVSMALYDLAAVLLPVGPLRLLVELAISRDEEIPALVYEARPVSNDSLEHVAARRRLWRERRIENSNTVVTENGSSVLGSSVLNVEQSHSNSDVNVVLGSNPNSNAPDDVNLAPENASNLNSSSSYGACNLVRAEEGRVQVRETDSDLVTPLIGRGPNVQVPIGEDAASNENLMLEGIGLASSGAIKLGLGDFIFYSVLVGRAAMYDFMTVYACYLAIIAGLGITLMLLALYQKALPALPVSIALGVLFYFLTRFELMVSSLVLV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03756 297 PRINTS Presenilin family signature 23 30 IPR001108 GO:0004190|GO:0016021|GO:0016485
Tsu04g03756 297 PRINTS Presenilin family signature 40 57 IPR001108 GO:0004190|GO:0016021|GO:0016485
Tsu04g03756 297 Pfam Presenilin 2 287 IPR001108 GO:0004190|GO:0016021|GO:0016485
Tsu04g03756 297 PANTHER PRESENILIN HOMOLOG 2 289 - -
Tsu04g03756 297 PANTHER PRESENILIN 2 289 IPR001108 GO:0004190|GO:0016021|GO:0016485
Tsu04g03756 297 Gene3D Presenilin 203 293 IPR042524 -
Tsu04g03756 297 SMART psh_8 1 289 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03756 Tsu-Chr4 46520369 46521816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03756 1 291 Miscellaneous Gene Families AT2G29900 55.822 4.25e-89 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03756 K04505 - gmx:100780823 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03756 04 46520369 46521816 Tsu04g03756 04 46520369 46521816 ECH