Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03750 ATGGCTGTTGCTGCTCTTGCTCTTGCACTTCTTCTTTTACCCTTCACCGCCATTCCATCAAGTGCTAATTGGTGTGTTTGCAAGGATGGAGCTGATGCAATCTTGCAAAAAACATTGGACTATGCTTGTGGAGCTGGTGCTGACTGTAACCCTCTCCATCAAAACGCACCTTGTTTCCAACCAAACACTGTTAGAGCTCACTGCAGTTATGCTGTGAATAGCTTTTACCAAAAGAAGGGTCAAGCTCAAGGAACTTGTGACTTTGCAGGAACTGCTACTGTTGTTGCATCTGATCCAAGTGTTAGTGGCTGTGCCTACCCTTCAAGTGCCagTGGTGCAGGCACTAGTACAACAACCCCAGTGTCAGGCACTACACCCTCATTGGGAACCACCCCTTCCACCGGAACCCCGTCAACAAGTACAGGCACAGGCACAGGCTCTGGCATGGGCACTGGCACTGGCACCGGAACCGGTACCGGTACCGGCTCTACTCCATACAGCACAACTCCGGGAGTATTAGGAGGTATAGGTAGTGGTATGGGGCCATCTGGAGCTGGAGGAATGAATGATGATAGTCATGGTGGAATTAGACTTTTGGACACTAGTTTCTTATCAATCCCACTCTTTTCTGTCTTCATTATGCTTTGGTGgggttga 657 0.484 MAVAALALALLLLPFTAIPSSANWCVCKDGADAILQKTLDYACGAGADCNPLHQNAPCFQPNTVRAHCSYAVNSFYQKKGQAQGTCDFAGTATVVASDPSVSGCAYPSSASGAGTSTTTPVSGTTPSLGTTPSTGTPSTSTGTGTGSGMGTGTGTGTGTGTGSTPYSTTPGVLGGIGSGMGPSGAGGMNDDSHGGIRLLDTSFLSIPLFSVFIMLWWG 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03750 218 MobiDBLite consensus disorder prediction 109 166 - -
Tsu04g03750 218 Gene3D - 18 116 - -
Tsu04g03750 218 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 1 206 - -
Tsu04g03750 218 PANTHER BETA-1,3 GLUCANASE 1 206 IPR044788 -
Tsu04g03750 218 Pfam X8 domain 24 93 IPR012946 -
Tsu04g03750 218 SMART X8_cls 23 106 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03750 Tsu-Chr4 46459737 46464477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03750 24 108 Glycoside Hydrolase AT2G05790 49.425 3.92e-22 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03750 - - gmx:100812033 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03750 04 46459737 46464477 Tsu04g03750 04 46459737 46464477 ECH