Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03728 ATGACTTCCTCGCCGCACCGTTCCGGCGGCGAAGGCGACGCTAACGCTGACAAAAGGCCGAGATTTTTTGACACAAAGACGAAAAACATCTGTTGGACAAAGGCTGACACTGTGCCTGGCCGTCACCCAGAAAGGTGGCGCAAAGATGCCGCCGGTAACATTGTCTGTAAACGTTTCTTCAATTGCCTTGGCTGTCTCTGCTACGAGTACGATCACATCATCCCTTATTCCAAAGGGGGTGAATCAACGGCTGATAATTGCCAAATACTTCAATCAAGAGTCAAcagattaaaatcaaacaaagatCAGATTGATTCGGATAAGTTAAGAGGCTACTCTTGTGATATTAATTTTACTGACAAGGAGCTTGACATAATTGAGATGGCTGTTTATGGCGATGTAATCCGGCCAGGAAACCAGTGTAGATGCAGAACTATTGATGAAATGCTTGGAAAATTCAAGGCCAAAGACAACACAAATGCATGCAAGTTGCCATAG 498 0.4357 MTSSPHRSGGEGDANADKRPRFFDTKTKNICWTKADTVPGRHPERWRKDAAGNIVCKRFFNCLGCLCYEYDHIIPYSKGGESTADNCQILQSRVNRLKSNKDQIDSDKLRGYSCDINFTDKELDIIEMAVYGDVIRPGNQCRCRTIDEMLGKFKAKDNTNACKLP 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03728 165 Pfam HNH endonuclease 67 100 IPR002711 GO:0003676|GO:0004519
Tsu04g03728 165 PANTHER F6A14.21 PROTEIN 13 165 - -
Tsu04g03728 165 CDD HNHc 57 99 IPR003615 -
Tsu04g03728 165 Gene3D - 25 116 - -
Tsu04g03728 165 SMART HNH_5 50 96 IPR003615 -
Tsu04g03728 165 PANTHER HNH ENDONUCLEASE 13 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03728 Tsu-Chr4 46275261 46278131 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03728 - - lang:109344321 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03728 04 46275261 46278131 Tsu04g03728 04 46275261 46278131 ECH