Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03720 atgGGAAAAGAGAATACAACAGTTCACAAAAGAAGCAGTAGTGCAGGTTTACCAACAACAACTACCAACAGCAAAAACCGCCGTGGCCGACAGATCCACAAAACATTCAACAACATTAAAATCACAATCCTCTGTGGTTTCGTAACAATCCTCGTCCTACGTGGTACTATCGGTGTTAATCTCAGTTCCTCCGATTCCGACGCTGTTAACCAAAACatcattgaagaaacaaacCGTATCCTCGCCGAGATCCGATCCGACGCTGACCCATCTGATCCTAATGATAAAGATGAAACCTTTTTCAATCCAAACGCTACTTTCACACTTGGCCCCAAGATTTCTGATTGGGATTCTCAGCGTAAGACATGGCTTGTTGAAAACCCTGAATATCCAAATTTTGTTGGAGGTAAAGCTCGAATCTTGTTACTTACTGGGTCTCCTCCTAAGCCTTGTGATAACCCAATTGGGGATCATTACTTGTTGAAGTCTATTAAGAATAAGATTGATTATTGTAGATTACATGGGATTGAAATTGTTTATAATATGGCTCATCTTGATATTGAACTTGCTGGTTATTGGGCTAAATTGCCTATGATTAGGAGGTTGATGTTGTCACATCCTGAAGTTGAATGGATTTGGTGGATGGATAGTGATGCATTGTTTACTGATATGGTTTTTGAGCTTCCTTTGTCTAagtatgatgattataatttggtTATTCATGGTTATCCTGATTTGTTGTTTGAGCAGAAGTCATGGATTGCTATCAATACTGGTAGTTTTCTTTTTAGGAATTGTCAGTGGTCTTTGGATTTGCTTGATGAATGGGCTCCAATGGGTCCTAAAGGTCCTGTTCGAGAAGAGGCCGGGAAGGTCTTGACGGCTAATCTTAAAGGGAGACCGGCTTTTGAGGCTGATGATCAGTCtgctttgatatatttgttgcTGTCTAAGAAGGAAAAGTGGATGGATAAGGTTTTTCTTGAGAATTCTTACTATTTGCATGGTTATTGGGCTGGGTTGGTTGATCGGTATGAGGAGATGATTGAGAAGTATCATCCGGGATTAGGGGATGAGAGGTGGCCGTTTGTGACTCATTTTGTGGGTTGTAAGCCGTGTGGAAGCTACGGAGATTATCCTGTTGAGAGGTGTCTCAGTAGTATGGAGAGGGCTTTCAATTTTGCTGATAATCAAGTGCTTAAACTCTACGGGTTCAGGCATCGCGGTCTGTTGAGTCCTAAGATTAAGAGAATTAGAAATGAGACAGTTACTCCTTTGGAGTTTGTCGACCAGTTTGATATTCGAAGGCATTCTACAGAAAGTAGTGAATCAAAAAGCTAG 1341 0.396 MGKENTTVHKRSSSAGLPTTTTNSKNRRGRQIHKTFNNIKITILCGFVTILVLRGTIGVNLSSSDSDAVNQNIIEETNRILAEIRSDADPSDPNDKDETFFNPNATFTLGPKISDWDSQRKTWLVENPEYPNFVGGKARILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNMAHLDIELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDALFTDMVFELPLSKYDDYNLVIHGYPDLLFEQKSWIAINTGSFLFRNCQWSLDLLDEWAPMGPKGPVREEAGKVLTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSYYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEFVDQFDIRRHSTESSESKS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03720 446 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 10 440 - -
Tsu04g03720 446 MobiDBLite consensus disorder prediction 7 26 - -
Tsu04g03720 446 Pfam galactosyl transferase GMA12/MNN10 family 137 375 IPR008630 GO:0016021|GO:0016757
Tsu04g03720 446 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 137 284 IPR029044 -
Tsu04g03720 446 MobiDBLite consensus disorder prediction 1 29 - -
Tsu04g03720 446 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 10 440 IPR008630 GO:0016021|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03720 Tsu-Chr4 46215490 46217579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03720 1 446 Glycosyltransferase AT5G07720 77.462 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03720 K08238 - gmx:100819400 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03720 04 46215490 46217579 Tsu04g03720 04 46215490 46217579 ECH