Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03704 ATGATGTTTAATAAGGTGATTGTTATTATAGTAGCTATTATTTTGGGAATTTGGCTTGAAGGATGTGATTGTAAGGTTGTGCAATTTATATTTGGAGATTCTCTTTCTGATGTTGGAAACAATAGGCATCTCTCTAGAAGTCTTGCTCAAGCAAACTTGCCTTGGTATGGTATAGACATGGGTAATGGTTTGCCTAATGGAAGATTCTCTAATGGTCGCACCGTTGCTGACATTATAGGTGATAGTTTAGGCCTACCAAGGCCCCCTCCAGTACTAGACACGTCTTTAACTGAAAAAGATATACTAATAAATGGATTAAACTATGCTTCTGGAGGTGGTGGTATCTTGAATGAGACTGGCACCTATTTTATTGAAAAGTTATCACTAGACAAACAAATTGAGCTGTTTCAAGGGACACAAGAATTAATTAGAAGCAAAATTGGAAAAAGAGCTGCAGACAAGTTTTTTAGAGAAGCTCAATATGTTGTTGCTTTAGGTAGCAATGACTTTATCAACAACTACTTGATGCCTCTTTACACTGATTCATGGACATACAATGATGAAACCTTCATGGATTACTTGATAGGAACACTGAGAAAACAATTAAAGgtaCTTCATGGTTTAGGAGCAAGGCAATTGATGGTTTTTGGGTTGGGTCCAATGGGCTGCATTCCCCTTCAAAGGGTACTTACTACAACTGGAAATTGTCGAGAAAAAGTAAACAAGCTGGCCCTTAGCTTTAATAAAGCTTCAAGTGAACTAATTGATGACTTGGTGAAGGAACTTCCTAATTCAAACTATAGATTTGGAGATGCATATGATGTTGTGTCTGATTTGATTAGCAACCCACTTAAGTATGGATTCCAAAACTCAGACTCGCCATGTTGTTCCTTTGGGAGAATTAGACCTGCACTCACATGTGTACCTGCATCAACACTATGCTCAGACAGAAGCAAATATGTGTTTTGGGACGAGTATCATCCCTCGGACAGTGCTAATGAGCTAATTGCAAATGAACTTATTAAGAAATTTGGATTATCAAGTTCTGGTCAAAATGCTGCTCCTTCACCAGCACCTGCTATTGCTCCATCTCCACAAGACTAA 1104 0.3813 MMFNKVIVIIVAIILGIWLEGCDCKVVQFIFGDSLSDVGNNRHLSRSLAQANLPWYGIDMGNGLPNGRFSNGRTVADIIGDSLGLPRPPPVLDTSLTEKDILINGLNYASGGGGILNETGTYFIEKLSLDKQIELFQGTQELIRSKIGKRAADKFFREAQYVVALGSNDFINNYLMPLYTDSWTYNDETFMDYLIGTLRKQLKVLHGLGARQLMVFGLGPMGCIPLQRVLTTTGNCREKVNKLALSFNKASSELIDDLVKELPNSNYRFGDAYDVVSDLISNPLKYGFQNSDSPCCSFGRIRPALTCVPASTLCSDRSKYVFWDEYHPSDSANELIANELIKKFGLSSSGQNAAPSPAPAIAPSPQD 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03704 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 357 - -
Tsu04g03704 367 SUPERFAMILY SGNH hydrolase 159 343 - -
Tsu04g03704 367 MobiDBLite consensus disorder prediction 348 367 - -
Tsu04g03704 367 CDD SGNH_plant_lipase_like 29 343 IPR035669 -
Tsu04g03704 367 Pfam GDSL-like Lipase/Acylhydrolase 29 339 IPR001087 GO:0016788
Tsu04g03704 367 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 1 357 - -
Tsu04g03704 367 Gene3D SGNH hydrolase 27 345 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03704 Tsu-Chr4 46086189 46088638 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03704 29 340 Acyl Lipid Metabolism Gene Families AT4G10950 32.803 4.06e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03704 - - gmx:100815129 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03704 04 46086189 46088638 Tsu04g03704 04 46086189 46088638 ECH