Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03689 ATGGAAACGGCGGGGCAGTGGCTGGAGAAGGCGTTGGTGGAATTATGCTCGAAGATCGAAACGGGATTAGGTTTAGGTTTAGATGAAGAAATTATTAAAGGACTCGTTTCTTACTGTGATCTTGCTCAGCCACGAGATGCTAAAGAATACCTTGACAACATTATTGGTCAGGAAGTAGGGAAATCTGTGATTGAAGAATACTTAAGACGCCGAGGTTACTCGGAATTAAGCACTAAATCAAATGTTCcacctactactactactaccaaATTGCATACCTATATCAAACCACCTTCGGTTGAAACATCCACTAGTGGATCTAAGAAATCGACGAGAACACCAAAAACAGTAGTTGTCCGCGGTGATCATGTGCAACCTAACAAGAATGCTGCTGTCGTcggtagtagtagtagtaatcaGGGAAATGGGATTTCAGCTACAGGTAGTGAATCAGGAACATCACAAAAAGGAAATCAAGTGAGTTCCAGAAAGAAGAAAGCTATGAAAACTATTTCGCTTGCTGAGGCAGCTAAAGGGTCGATTGTTTTCCAGCAAGGAAGACCGTGCGTTTGTCAAGCGCGTCGTCATAATCTAGTCAGCAATTGTTTATCTTGTGGTAAAATTGTTTGTGAGCAAGAAGGAGAGGGGCCTTGTAATTTTTGTGGTGCACTTGTATTGAAAGAGGGAAGCTCGTATGCTGGTTTGGAAGAAAGTTTGCCTCCCTTGTCAGAGACTGAGGCTGCTGCTGAAGCTTACGCAAAGAGGCTTGTTGAATATGACCGAAATGCTGCAGCTCGTACAACAGTTATTGATGACCAAAGTGACTACTATGAGCTTGATTCAAATACTTGGTTGTCACCAGAGgAGAAAGAACTGTTGAAGAAGAAACAAGCGGAGATGGAAGAAGCGGAACAAGCCAAACGGAACAAAGTTGTCGTGACTTTTGATCTAGTTGGCCGCAAGGTTCTTCTGAATCAAGATGAAGTTTTAGAATCACAGTCCGACAATAGATTATTACGTGCACCCGAAGAAAGGGAAGTGAACCGCATTAAACCAAATCCATCTCTTAAGATTCAGCCAGTTTTTGTAGACCTGGGCTTCAGTAAGAAGTCTGTGCCTGCTAACGATAGGCAAGCAAACAAAGGTAAGCAATCAAACAAAGGCCTAAACAAGGGACTGTGCTTGGAGATTACTGGAAGGGTGCAGCATGATAGCAGTGACTTGAAGTACCTTCAGCAAAACCAATTTGCAAGAgattcaaatgaaaaaaattggcAAGTACCTTCAGGAAATGGAGGACTGCACGTAGAAGATGATGGTGAATGTTCGCTAGACTTATGA 1341 0.4087 METAGQWLEKALVELCSKIETGLGLGLDEEIIKGLVSYCDLAQPRDAKEYLDNIIGQEVGKSVIEEYLRRRGYSELSTKSNVPPTTTTTKLHTYIKPPSVETSTSGSKKSTRTPKTVVVRGDHVQPNKNAAVVGSSSSNQGNGISATGSESGTSQKGNQVSSRKKKAMKTISLAEAAKGSIVFQQGRPCVCQARRHNLVSNCLSCGKIVCEQEGEGPCNFCGALVLKEGSSYAGLEESLPPLSETEAAAEAYAKRLVEYDRNAAARTTVIDDQSDYYELDSNTWLSPEEKELLKKKQAEMEEAEQAKRNKVVVTFDLVGRKVLLNQDEVLESQSDNRLLRAPEEREVNRIKPNPSLKIQPVFVDLGFSKKSVPANDRQANKGKQSNKGLNKGLCLEITGRVQHDSSDLKYLQQNQFARDSNEKNWQVPSGNGGLHVEDDGECSLDL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03689 446 Coils Coil 242 262 - -
Tsu04g03689 446 MobiDBLite consensus disorder prediction 77 165 - -
Tsu04g03689 446 PANTHER THYROID RECEPTOR INTERACTING PROTEIN RELATED 2 445 IPR039128 -
Tsu04g03689 446 MobiDBLite consensus disorder prediction 129 165 - -
Tsu04g03689 446 Coils Coil 286 313 - -
Tsu04g03689 446 MobiDBLite consensus disorder prediction 77 114 - -
Tsu04g03689 446 PANTHER TRANSCRIPTION REGULATOR/ ZINC ION BINDING PROTEIN 2 445 - -
Tsu04g03689 446 MobiDBLite consensus disorder prediction 419 446 - -
Tsu04g03689 446 Pfam Putative zinc finger motif, C2HC5-type 187 227 IPR009349 GO:0005634|GO:0006355|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03689 K23398 - gmx:100810833 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03689 04 45952804 45955425 Tsu04g03689 04 45952804 45955425 ECH