Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03661 ATGGCCAATGCTAGAGGTACTCCAAGATATGGAGTAATAAGACCTATGGCACGAACTCCAGTTGTTGAAGAGATTGTACCTAATTCTGGATGGACAGAGGACTCTACTGGCCATTATCTTCTAGTGGATCTTCCTGAATTCGTGAAGGAAGATGTCAAGCTTCAGGTTGATAGCAGTGGCCGAATAGTTGTCAAGGGAGAAAGGCAGGCAAGTGAGCAAAAACGCGTTAATTTTCACCTGAGTTTTCCAGCACCAGAGGATGCTGAGGTTGATAAGATTGCCGGAAAATTTGACGGGGGGATCCTTTACGTGACTCTCCCCAAGCGAATTGTACAAGAGAAGAACAAACAAAGCGACACTGAGGAAACTGGAATTAGCAGTGTTGAAAGAGCAGAAGAACATGATAGCCATAAAACCAGTGCTGATAGTGATGTTGAAGGGAGAGACCATAATCAACATGCTGgtcatgaagtacatgaagaagaaagaaatattgGTCATGAAGAACAcgaagaagaaagaaatgaaaatgcACACATGACGAATTTTTCTGGACAAGTAACAAGAAAGTGGGATCAAGAAACCATGTTAAGAACTGCAGTAGATGTTTTGAGTAAAAACAAAGGAATTGTTGTCACTGCTGTTATAGCCTTCTCCTTGGGGATGTATGTATCTagtaaatttcaattttcagaAGCACCATAA 705 0.3801 MANARGTPRYGVIRPMARTPVVEEIVPNSGWTEDSTGHYLLVDLPEFVKEDVKLQVDSSGRIVVKGERQASEQKRVNFHLSFPAPEDAEVDKIAGKFDGGILYVTLPKRIVQEKNKQSDTEETGISSVERAEEHDSHKTSADSDVEGRDHNQHAGHEVHEEERNIGHEEHEEERNENAHMTNFSGQVTRKWDQETMLRTAVDVLSKNKGIVVTAVIAFSLGMYVSSKFQFSEAP 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03661 234 CDD ACD_sHsps-like 31 108 - -
Tsu04g03661 234 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 20 123 IPR002068 -
Tsu04g03661 234 SUPERFAMILY HSP20-like chaperones 15 115 IPR008978 -
Tsu04g03661 234 PANTHER INACTIVE PROTEIN RESTRICTED TEV MOVEMENT 2-LIKE 15 232 - -
Tsu04g03661 234 Pfam Hsp20/alpha crystallin family 32 117 IPR002068 -
Tsu04g03661 234 PANTHER HEAT SHOCK PROTEIN 26 15 232 IPR045045 -
Tsu04g03661 234 MobiDBLite consensus disorder prediction 113 178 - -
Tsu04g03661 234 MobiDBLite consensus disorder prediction 113 187 - -
Tsu04g03661 234 Gene3D - 15 116 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03661 Tsu-Chr4 45660513 45661490 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03661 - - cam:101491080 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03661 04 45660513 45661490 Tsu04g03661 04 45660513 45661490 ECH