Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03656 ATGGAAGAAGCTCAAGTGCAAGTTTGGGAAGGCTATGTAGATTGGAGGAACAGACCTGCCATCAAAGGACATCATGGTGGAATGCTTGCTGCCTCCTTTGTTTTTGCTGTGGAGGTATTGGAGAACCTAGCATATATAGCAAATGCAAGTAACCTTGTTTTATACCTTACCAAGTTTATGCACTTTTCACCTTCTAGCTCTGCCAACATTGTCACCAACTTCATGGGAACAGCTTTCCTACTTGCTATTCTTGGTGGATTTCTTGCTGATGCTTTTTTCACTACTTATTCAATCTACCTTATAAGTGCTGCAATAGAATTCATGGGTCTACTAATGCTTACAATACAAGCTCACATACCACCACTGAAACCACCAAAATGTGTTATGGGAAGCACCAACAGTTTGTGCAAGACAATTCAAGGTGGAAAAGCAGCCATGTTATTTGCAGGACTCTATATGGTGGCACTTGGAGTAGGTGGAATAAAAGGTTCACTTCCTCCTCATGGTGCTGAGCAGTTTGATGAAACTACTCCAGAAGGAAGGAAGAAAAGGTCTGAgttttttaattactttgtcTTCAGCTTGTCATGTGGTGCATTGTTTGCAGTTACTTTTGTGGTTTGGATTGAAGACAACAAGGGATGGCAGTGGGGTTTAGGTGTATCAACTGCATCAATATTGCTCTCCATTCCAGTTTTTCTTCTTGGTTCACATAAGTATAGAACCAAGGTTCCAGCTGGAAGCCCTATCACACCTATGTTCAAGGTTCTTGTGGCAGCAATTTGCAACTACTACAAATCCAAAAATTCATCGACCAACGCTATCACCAGCATGCCAATAACTCCATCCTATACAGCTGAAATAGGAGATGGAGAACAAACCAACACTAGGAAAGATATAATGATAGATCAAACACCAATATCACAAAGCCTAAAATGCCTTAACAAAGCAGTAATTGAACCAGTTCatccaaaattaaaatgcaCAGTAAAAGAAGTAGAAGATgtgaaaattgtattaaaaatccTTCCCATATTCATGTCAACCATAATGCTAAACTGTTGTTTAGCTCAACTATCAACATTTTCTGTTCaacaatcatcaacaatgaaCACAATGCTCGGTTCATTCAAAGTCCCTCCAGCATCACTACCTGTATTCCCTCTCCTCTTCATCATGATCCTTGCACCACTCTACAACCATGTCATTGTTCCATTTGCTagaaaaataaccaaaacagaAATGGGAATAACACATCTGCAAAGAATAGGAACAGGACTGTTCCTATCAATTGTAGCTATGGCTGTTGCAGCATTAGTCGAAACACAACGAAAAAAAACAGCTTCAAAATATGGTTTATTAGATTCAACAAAACCACTTCCAATAACATTCTTGTGGGTGGCATTACAATATTTGTTTTTAGGTTCAGCTGATCTTTTTACATTGGCTGGTATGATGGAGTTTTTCTTCACTGAAGCACCATGGAGTATGAGGTCTTTAGCAACAGCACTTTCATGGACTTCATTGGCTATGGGATATTTTCTTAGCACTGTTCTTGTTTCTGTTATTAATAAGGTCACTGGGGCATTTGGACAAACACCTTGGCTGTTTGGTGAAAATTTGAATCATTATCATCTTGAGAGGTTTTATTGGTTAATGTGTGTGCTTAGTGGAATTAATTTTGCTCATTATCTCTTTTGGGCCAATTCCTATAAATATAGATCTTCACCAAATCATGGATACTAG 1746 0.3723 MEEAQVQVWEGYVDWRNRPAIKGHHGGMLAASFVFAVEVLENLAYIANASNLVLYLTKFMHFSPSSSANIVTNFMGTAFLLAILGGFLADAFFTTYSIYLISAAIEFMGLLMLTIQAHIPPLKPPKCVMGSTNSLCKTIQGGKAAMLFAGLYMVALGVGGIKGSLPPHGAEQFDETTPEGRKKRSEFFNYFVFSLSCGALFAVTFVVWIEDNKGWQWGLGVSTASILLSIPVFLLGSHKYRTKVPAGSPITPMFKVLVAAICNYYKSKNSSTNAITSMPITPSYTAEIGDGEQTNTRKDIMIDQTPISQSLKCLNKAVIEPVHPKLKCTVKEVEDVKIVLKILPIFMSTIMLNCCLAQLSTFSVQQSSTMNTMLGSFKVPPASLPVFPLLFIMILAPLYNHVIVPFARKITKTEMGITHLQRIGTGLFLSIVAMAVAALVETQRKKTASKYGLLDSTKPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTEAPWSMRSLATALSWTSLAMGYFLSTVLVSVINKVTGAFGQTPWLFGENLNHYHLERFYWLMCVLSGINFAHYLFWANSYKYRSSPNHGY 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03656 581 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 11 576 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu04g03656 581 PANTHER PROTEIN NRT1/ PTR FAMILY 4.7 11 576 - -
Tsu04g03656 581 CDD MFS_NPF4 28 568 - -
Tsu04g03656 581 Pfam POT family 100 536 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu04g03656 581 Gene3D MFS general substrate transporter like domains 1 578 IPR036259 -
Tsu04g03656 581 SUPERFAMILY MFS general substrate transporter 31 572 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03656 Tsu-Chr4 45630660 45634711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03656 3 576 Organic Solute Cotransporters AT1G69850 66.381 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03656 - K14638 gmx:100796577 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03656 04 45630660 45634711 Tsu04g03656 04 45630660 45634711 ECH