Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03646 ATGAACTCGATCGGAGAACAAATGACAAATGGTGAGACTGTGGAGAACGAAGAGGAAAGTTTGCTGAAGAACGAAAACAGTGGAGGAGATGATGACACTAAGATTAACTACAGGGGATGGAAGGTCATGCCCTTCATTATAGGAAATGAGATTTTTGAGAAGCTAGGAGCTATTGGAACTTTATCCAATCTCTTAGTCTATCTCACTACGGTATTCAACTTGGAAAACATCGCGGCTACAAATATTATCAATATCTTCAATGGCAGCACCAACTTTGCAACATTGATAGGAGCTTTTTCCTCTGATGCCTTTTTTGGTCGGTACAAGACACTATCATTCTGCACCGTCGCTTCCTTTCTGGGTTTGCTTGTAATACAACTAACAGCAGCAGTCAAGAAGCTGCATCCACATCCATGTGAAGAATTAGAAGACACCACATGCCAAGGGCCAACAGAGTGGCAAATGACAGTTCTAAAGACTGGTTTAGGATTATTGATGATAGGAGCTGCAGGGATCCGGCCATGTAACTTAGCATTTGGAGCGGATCAGTTCAATCCTAACACAGATTCTGGGAAAAAGGGGATCAGTAGCTTCTTCACTTGGTACTATTTCACTTTCACTCTTGCTCAAATGATATCCTTAACAATTATTGTCTACATACAGTCAAATGTAAGCTGGGCCGTGGGTTTGGGAATTCCTGCAGCTTTGATGCTTTTGTCCTCTGTAATCTTCTTCATGGGGGCCAAACTGTACGTGAAAGTTAAACCTAGTGGTAGTCCTGTAACTAGTATAGTACAAGTTATTGTGGTTGCAACAAAGAAAAGGAAGCTGAAGCTTGCAGAATATCTATACCCTTCACTCTTCAACTATGTGCCTCCAAAGTCAATGAATTCTAAACTTCCTTATACTTATCAATTcagGTTCCTTGACAAGGCAGCAATCATGACCCCACATGATCAAATAAATCCCAATGGATCTGCTTCTAATCCCTGGAATCTATGCAGTATGCAACAAGTTgaagaggtaaaatgcttgtTGAGAGTGTTGCCGATATGGCTTTCAGCCGTTTTGTACTATGTTGTTATTGTCCAACAGCACACTATTTTAGTGTTCCAAGCCCTTCTATCTGACAGGCGTATTGGCCAAAGTGAGTTCATGATACCAGGAGCATCCTACTATGTCTTTCTGATGATAAGTGTGGCAATTTGGTTGCCCATTTACGACCGGAAAGTTGTTCCATTTCTCCAAAGGATCACTCGAAAAGAAGGTGGCATCACACTCCTTCAGAGGATGGGAGTTGGCATATTTTTCGCTATACTCAGCATGCTAGTATCTGCCACAGTTGAAGAGCGACGTAGAAATCTGGCTCTGACAAACCCCTTAGAAGTGGAAACAAGAAAAGGAGCGGTTTCATCAATGTCAGGTCTGTGGCTGATTCCTCAGTTGGCATTGGCTGGACTAGGTGAAGCATTCATGTCTGTTGCACAGATTGAGTTTTACTACAAACAATTTCCTGAGAACATGAGAAGCATTGCAGGGTCTCTTTACTACGCGGCCCATGCAGGGTCAAGCTACTTGAGTAGTATGCTTATTTCAGGTATTCACCATATCACCGTCAGATCCAAAACTGGGAGTTGGTTGCCAGAGGATCTGAACAAGGGGAGATTGGATAACTTCTATCTCATTATTGCTGCTTTAGAAATTGTTAATTTAGGGTATTTTGTGATATGTGCACAGTGGTATAGGTACAAAGAAACAGACAACAGTTCAATCGAACTCGATAAAGTGGTGAAACAGTCCGAAAGAAGTGGTAATGATTTGAGTCTATAG 1830 0.4137 MNSIGEQMTNGETVENEEESLLKNENSGGDDDTKINYRGWKVMPFIIGNEIFEKLGAIGTLSNLLVYLTTVFNLENIAATNIINIFNGSTNFATLIGAFSSDAFFGRYKTLSFCTVASFLGLLVIQLTAAVKKLHPHPCEELEDTTCQGPTEWQMTVLKTGLGLLMIGAAGIRPCNLAFGADQFNPNTDSGKKGISSFFTWYYFTFTLAQMISLTIIVYIQSNVSWAVGLGIPAALMLLSSVIFFMGAKLYVKVKPSGSPVTSIVQVIVVATKKRKLKLAEYLYPSLFNYVPPKSMNSKLPYTYQFRFLDKAAIMTPHDQINPNGSASNPWNLCSMQQVEEVKCLLRVLPIWLSAVLYYVVIVQQHTILVFQALLSDRRIGQSEFMIPGASYYVFLMISVAIWLPIYDRKVVPFLQRITRKEGGITLLQRMGVGIFFAILSMLVSATVEERRRNLALTNPLEVETRKGAVSSMSGLWLIPQLALAGLGEAFMSVAQIEFYYKQFPENMRSIAGSLYYAAHAGSSYLSSMLISGIHHITVRSKTGSWLPEDLNKGRLDNFYLIIAALEIVNLGYFVICAQWYRYKETDNSSIELDKVVKQSERSGNDLSL 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03646 609 CDD MFS_NPF1_2 43 581 - -
Tsu04g03646 609 MobiDBLite consensus disorder prediction 1 15 - -
Tsu04g03646 609 Pfam POT family 109 546 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu04g03646 609 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 24 594 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu04g03646 609 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT 24 594 - -
Tsu04g03646 609 SUPERFAMILY MFS general substrate transporter 56 582 IPR036259 -
Tsu04g03646 609 MobiDBLite consensus disorder prediction 1 28 - -
Tsu04g03646 609 Gene3D MFS general substrate transporter like domains 13 590 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03646 Tsu-Chr4 45522309 45526060 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03646 30 603 Organic Solute Cotransporters AT5G62680 58.997 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03646 - - gmx:100798182 1013.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03646 04 45522309 45526060 Tsu04g03646 04 45522309 45526060 ECH