Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03636 ATGACGAAGACGACCAAAGGTGGTAAGGTCATGAACCCTACCGATGCTTATCGCAAGGAGCTTCGGAAGAAGGAATTGAAAAGGaataagaaagaaagaaagaaggtgAGGGAAGTGGGGATTTTGAAGAAAGATCCTGATCAAATAAAAAAGCAGATTGATAACTTAGAAATGATGAAGGCTGATGGTGCCTTGGATAAAGCAAGAAAGCACAAGAAGAGGCAACTGGAAGATTCTCTTAATCTTGTCCTGAAGAAGAGGAAGGAATATGAAGAGAAAATGCGGGAGAAGGGTGAGGCCCCTGTTATGTTCAGTCATTTGGGGCCTCCTCGAAGGAGAACAAGCGCAGAAGAGGAAGAGAGAGTTAATCACCCACTACCAGAGGACTCTGTTTATTACCATCCTACCTTAAATCCTACCGGGGCTCCACCGCCAGGGAAACCTCCTATGTTCAAATCATCTATAGGACCTAGAATTCCCTTGGTTGGTTCCTCAAGTACTGCTGCATCATCCTTGGCAACAGAGTCCGAGGATGGTGTATTAGTCGTACCTCCACCTCCCCCACCACCACCACTGCCTGATGCTAGTTCAGCTGACGGTACTGTTTTACCCGCATCTTTGCCACTGCCTCCCCCACCTCCGATGCCTCCAAAGCCCGCTGCTGCAGTGCCTGCATCGTTACCACCACCTCCTTTGCCGCCTCCACCTCCTGGTCCTCCACCTAAAGAGCAAGCTGTAAATCGGTCTTTACCCCCTCCTCCTCCACCCCTGCAACAGTCTCAGCCACCTCCACCTGGCACCAGTGAAGGTGAAGTGAGAAATCAGTCTGCATTGCCAGATAATCTATCTTCCAAGGAGCCTGGTCAGGTGCAGCTGCCTCCGCCGCCTCCTCCACCAAGTCGCATGCCACCAAATTCTGGAACCAATCAGTCTGATGGTGCTGTGGTTTCTACTGACAATAAGAATTCTCTGTCAAACCAGGACATCCAAAAAATGGTTCCTGGGCCTCCTCCTCCAAGGCAACAACCTCCTGGTCCAGGATCCACATTAATCCCAAGTTTACAGCCTGATGTATTGCCTCCTGGAATAGCTCGGTTCCCACCACCACCACCCCCACCTGATATGAGACCTCCCTTACCTGTGGCTGGACTTCCTGGTCAGGCACCACCTCCTGGAATGATGGTCCCCATAATCCCAAGGCCCCCATATGGTCCTCCACCTGGGCCTCCTCCAATGATGAGACCGCCACTTCCACCTGGTCCTCCTCCAAACTTTCACGAAGAGGATTATATGGCAATTAAGCCAGCTCCTCCTCAGAAACCATCATATGTTAAATCTGCTGCTTCTACTGTTGTTAAAAGGCCATTAGCTCAGCACACTCCAGAACTCACTTCAATGGTTCCTGCATCTGTGCGGGTGAGAAGGGAGACTGCAATgaccaaaacaaaaccaaaaccgCCAGTGTCAACATCAAGATCTAGGACAGTCTCTGCGACACCAGGGCCAAGGCCAACTATTGTAAAACCAGAGCCAGTGAGCTCGTCATCTGCTTCAAAAGCACCCAGCATTGACGACTCATACTCAGCTTTCTTAGAGGACATGAAAGCCCTTGGTGCCCTTGATGGTTGA 1629 0.4923 MTKTTKGGKVMNPTDAYRKELRKKELKRNKKERKKVREVGILKKDPDQIKKQIDNLEMMKADGALDKARKHKKRQLEDSLNLVLKKRKEYEEKMREKGEAPVMFSHLGPPRRRTSAEEEERVNHPLPEDSVYYHPTLNPTGAPPPGKPPMFKSSIGPRIPLVGSSSTAASSLATESEDGVLVVPPPPPPPPLPDASSADGTVLPASLPLPPPPPMPPKPAAAVPASLPPPPLPPPPPGPPPKEQAVNRSLPPPPPPLQQSQPPPPGTSEGEVRNQSALPDNLSSKEPGQVQLPPPPPPPSRMPPNSGTNQSDGAVVSTDNKNSLSNQDIQKMVPGPPPPRQQPPGPGSTLIPSLQPDVLPPGIARFPPPPPPPDMRPPLPVAGLPGQAPPPGMMVPIIPRPPYGPPPGPPPMMRPPLPPGPPPNFHEEDYMAIKPAPPQKPSYVKSAASTVVKRPLAQHTPELTSMVPASVRVRRETAMTKTKPKPPVSTSRSRTVSATPGPRPTIVKPEPVSSSSASKAPSIDDSYSAFLEDMKALGALDG 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03636 542 Coils Coil 73 93 - -
Tsu04g03636 542 MobiDBLite consensus disorder prediction 205 263 - -
Tsu04g03636 542 MobiDBLite consensus disorder prediction 332 350 - -
Tsu04g03636 542 MobiDBLite consensus disorder prediction 483 500 - -
Tsu04g03636 542 MobiDBLite consensus disorder prediction 305 330 - -
Tsu04g03636 542 Pfam WW domain binding protein 11 8 84 IPR019007 GO:0006396
Tsu04g03636 542 MobiDBLite consensus disorder prediction 111 127 - -
Tsu04g03636 542 MobiDBLite consensus disorder prediction 264 288 - -
Tsu04g03636 542 MobiDBLite consensus disorder prediction 509 523 - -
Tsu04g03636 542 PANTHER WW DOMAIN-BINDING PROTEIN 11 2 541 IPR019007 GO:0006396
Tsu04g03636 542 MobiDBLite consensus disorder prediction 361 425 - -
Tsu04g03636 542 MobiDBLite consensus disorder prediction 289 304 - -
Tsu04g03636 542 Coils Coil 14 34 - -
Tsu04g03636 542 Pfam mRNA biogenesis factor 127 185 - -
Tsu04g03636 542 PANTHER WW DOMAIN-BINDING PROTEIN 11 2 541 - -
Tsu04g03636 542 MobiDBLite consensus disorder prediction 181 195 - -
Tsu04g03636 542 MobiDBLite consensus disorder prediction 1 39 - -
Tsu04g03636 542 MobiDBLite consensus disorder prediction 93 525 - -
Tsu04g03636 542 MobiDBLite consensus disorder prediction 159 174 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03636 - - gsj:114393646 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03636 04 45431594 45437753 Tsu04g03636 04 45431594 45437753 ECH