Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03634 ATGTCTCACGGATCTTCTTCTCCGCTTCCCGCCGACCGATCATCGCCGTCGCCGGAACAACTTTCTCAAAAagaccaacaacaacaaccaccacccGCCGCCGCTGCTCCTCTTCCTCCGACCACTAGAAGCAACCGTCCTTCCCGCGCCTGCACGATTCGTGCTGCTTCACGTCTTTATACCTCACAGCAACCGGTAATTGAACGGAAACCGAAGAAGGACCAACGACGGGAGAGGAGACGGGTGGAGcaagaggaggaggaggaggaggagattGAAGAGTCTCCTCCGACGCAATGTAGTAAGATCGTTACACCGTTGGTTGAACCGCCGTCTGAATCGCAGTTGCCACGGTGGAATCTTCGGTCTATGTGGGAGTTAGCTTCCGTACTTAATTTCTTGAATTTATTTAGGCCTTTGTTGAATATCTCACTTGAATTTTCTGCTGAAGAGTTTGAGACTGCACTTCTTAACCCCAATGACACTTTGTTTTACATTCACATGCCTTTGTTAAAGGCAATCCCTCCTATCACACGAATGGCACTCACACGTGATACTTGGATAACCGTATTATGCAGAAAATTGAGAGATTGGTGGCATTGGGTTGCTGAGGGGGATCTTCCAATTGTTGCTTCACATGGGACGGAGATTGAAGTATATAAATCACTTGATCCAGCAGTCCGTGTTATCATTTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCCGAAATTATATCGACAACTCAATCAAACATGGTGCTCAACTTTCAACATTCCGTAAAGAGCGTATTGGAGGTGATTCAAATGGAATCTCTTATTGGTATGAAGATGACCCCATGATTGGCCATAGGTTGTATCGAGAAACAAGGAAAACTGAAGTGACTCAACCAAGGAAAGGGAAACCGAGAGGTTCGCAGGTTCTTTCTAGTACATCATACCAGTGGGAAGCAGTTGCTACAAATTTTGATGAGTTTCAAGACGTTTCTGAGAAGCTTTTCTCAAGTAAAAACAGAACAGAGACTTCTGTGGGGAAAAAGCTGAAGATAGACATGCTTCCTGAAATTGAGAAAGTTCACAAGAAAAAGGAGCGGTTGCTGAAAAAGCAACACAGAGAAGCTCTTCTTCTTGATAATTACATGATTGCTGATGGGATTTCTGCTGGGCGTGCACTTCGTGACAGGAAACCTGTAACCTACACTTTTGATGATTATGATCGATCAATCAATGAGGCAATTAAAGTAACCAAGCGGAAACAGTCATCCCCAGAAGAACCTATGCCTAGGAGAGAACCAGTAGCAAAACCTGAAGCTCTGACTAATGGTAACCATGGTCCTTCACATGCTGCACAACATCAGAATTTTGGTATCTCATCTCCAGAATCATTCGACTCTGATGACGACGATGATGAATATGATAATACTGACAATTTGGACCGAAGTGGTCGTCGGAGAAGGAAACCTAAGCGGTATTCAGGTAATGAGTTTGTTGAAGAAGTATCAGATTATGAGGCAGAATTTGACAGTGATGATGATATTGTTGGAGAAGTTGtatatgatgaagaatatctcAAGAAACGCAAGCAGAGAAGGAAGCATTCTAGTAGCTCTGAAGGAGATGAGGAATATCAATGGGATGATGATAATgtagaagaggaagaagaggaggaggaggaggatgaaGACTCGGCAAGCATGAGTGAGGATAGTGACAAACCCCGCAAAGTCAAACGATTGCCAGGACGAACTAGGAGGGAAACGAAACTCAGGTCTGTGGGTGATATTCAATCAAGTCCAAGACGCAGTAAGAGGGCTACTAGAAATCGTATAAATTACAAACAATATGAGATGTCGGATTCAGAAACCGAGTTTACCAAACCTGGGAAGTCTAATGCATCATCAGCTGATCACTCAGATCCCAGCGATGAGATTGAGAATGAAAATCagaatgagaatgagaatggAGAATATGTGATGGAAAGTGAAGATTCAGATAGCATTGAAGATGAAGATCAGAAAATGAAGGTAGAAGAGCCTGTTAGTGTTCCTTACCCTGTAGTAGAAGAAGAGAATGAAGATCAGAAAATGAAAGTAGAAGAACCTGTTAGTCCTCCTGGTCAAGATGAAGTTGAGGGCACGGGAAAAAGACGTTTCCTTGATTTGAATGAGCTTGCTCCTAGCCCTGGTTTTGACGAtggtccaaatacagtaataaaaGATGAAGACAACGATTACTGA 2244 0.4042 MSHGSSSPLPADRSSPSPEQLSQKDQQQQPPPAAAAPLPPTTRSNRPSRACTIRAASRLYTSQQPVIERKPKKDQRRERRRVEQEEEEEEEIEESPPTQCSKIVTPLVEPPSESQLPRWNLRSMWELASVLNFLNLFRPLLNISLEFSAEEFETALLNPNDTLFYIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWHWVAEGDLPIVASHGTEIEVYKSLDPAVRVIILKALCDIRVEQEDIRNYIDNSIKHGAQLSTFRKERIGGDSNGISYWYEDDPMIGHRLYRETRKTEVTQPRKGKPRGSQVLSSTSYQWEAVATNFDEFQDVSEKLFSSKNRTETSVGKKLKIDMLPEIEKVHKKKERLLKKQHREALLLDNYMIADGISAGRALRDRKPVTYTFDDYDRSINEAIKVTKRKQSSPEEPMPRREPVAKPEALTNGNHGPSHAAQHQNFGISSPESFDSDDDDDEYDNTDNLDRSGRRRRKPKRYSGNEFVEEVSDYEAEFDSDDDIVGEVVYDEEYLKKRKQRRKHSSSSEGDEEYQWDDDNVEEEEEEEEEDEDSASMSEDSDKPRKVKRLPGRTRRETKLRSVGDIQSSPRRSKRATRNRINYKQYEMSDSETEFTKPGKSNASSADHSDPSDEIENENQNENENGEYVMESEDSDSIEDEDQKMKVEEPVSVPYPVVEEENEDQKMKVEEPVSPPGQDEVEGTGKRRFLDLNELAPSPGFDDGPNTVIKDEDNDY 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03634 747 MobiDBLite consensus disorder prediction 1 104 - -
Tsu04g03634 747 MobiDBLite consensus disorder prediction 1 30 - -
Tsu04g03634 747 MobiDBLite consensus disorder prediction 520 542 - -
Tsu04g03634 747 MobiDBLite consensus disorder prediction 690 720 - -
Tsu04g03634 747 MobiDBLite consensus disorder prediction 501 519 - -
Tsu04g03634 747 MobiDBLite consensus disorder prediction 416 434 - -
Tsu04g03634 747 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 220 250 IPR028942 -
Tsu04g03634 747 PANTHER REMODELING AND SPACING FACTOR 1 22 746 IPR028938 GO:0006355|GO:0031213
Tsu04g03634 747 Coils Coil 72 95 - -
Tsu04g03634 747 MobiDBLite consensus disorder prediction 41 64 - -
Tsu04g03634 747 MobiDBLite consensus disorder prediction 647 669 - -
Tsu04g03634 747 MobiDBLite consensus disorder prediction 543 568 - -
Tsu04g03634 747 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 22 746 - -
Tsu04g03634 747 MobiDBLite consensus disorder prediction 446 463 - -
Tsu04g03634 747 MobiDBLite consensus disorder prediction 416 747 - -
Tsu04g03634 747 MobiDBLite consensus disorder prediction 67 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03634 Tsu-Chr4 45415728 45422565 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03634 - - gmx:100795519 990.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03634 04 45415728 45422565 Tsu04g03634 04 45415728 45422565 ECH