Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03633 atgtTGTCTCTAAAAATGACTGAGATGTGGACAACAATGGGATCAACCTTAGCAAGTTTCATGTTCATTTGGGCTATCATAAGACAATATTGTCCATACCAACTTCTACGTTTCTTTGAAAAATATAGTCATAGAATCATGGACTATTTCTACCCTTACATAAGAATCTCATTCCATGAATTCTTAGGTGATAGACTCAAAAGAAGTGATGCTTATGGTGCTGTTGAAGCTTATCTAAGTGCTAACACATCAAAGAGTGCAAAAAGACTCAAAGCTGAGATTGGAAAAGATAGCACAAACTTAGTCTTAACAATGGATGAATATGAAAGAGTAACTGATGATTACAAAGGTGTGAAAGTTTATTGGGTTTGTAGCAAAGTTATGTCAGCTTCAAGATCTATGCCTTATTATCAAGAACAAGAGAAAAGATTCTATAAGTTAACTTTTCACAAGAAGTATAGAGATACAATAACTGGTTCATATTTGGATCATGTGATGAAGGAAGGGAAAGAGATTCGTTTGAGGAATAGACAGAGGAAATTGTATACAAATAGTCCTGGTTACAAATGGCCAAGTTATAAGCAAACTATGTGGAGTCACATTGTTTTTGAACATCCTGCAACATTTGAAACAATGGCTATGGAAccagagaagaaaaaagagattatTGAAGATTTGGTTACTTTTAGTAAAAGTAAGGATTTTTATGCTAGGATTGGAAAAGCTTGGAAAAGGGGTTATTTACTTTTTGGTCCTCCAGGTACTGGAAAATCAACAATGATTGCTGCTATGGCTAATTTATTGGGTTATGATGTTTATGATTTGGAGTTAACAGCAGTGAAAGATAACACTGAGTTGAGGAAGCTTTTGATTGAAACAACTAGTAAGTCAATAATTGTTATTGAAGATATTGATTGTTCACTTGATCTTACAggtcaaagaaagaaaaaaggtgAAAGTAAGTTTTTTTCTgatgatgagaatgaaaatAAGGTGAGTCTTGATGCTTTGAGGAAGGAGGTGAAGGAAGAAGGAAGTGGAGGTGGGAATAGCAAAGTTACACTTTCAGGGCTATTGAATTTTATTGATGGAATTTGGTCAGCTTGTGGAGGTGAAAGGTTGATTGTTTTCACAACTAATTATGTGGAAAAACTTGATCCTGCATTAATTAGGAGGGGTAGAATGGACAAACATATTGAACTTTCTTATTGTAGTTTTAATGGTTTTAAAGTGCTTGCTAATAATTACTTAAGAGTTGATAATCATGTATTGTTTGAGAGTATTGAGAAGCTAATTGGTGAAGTGAAGATTACACCTGCTGATGTTGCTGAGAATCTTATGCCTAAGTCACCTATGGATGATGCTGATAAGTGTCTTTCAAATTTAATTGAAGCTCTTGAGGAGATGAAACAATGTAGTAAAATTAAGGAACAAGGTGATGAAGTTGAACACATTGGTGCTATTAAGGAAAATGGTAAgtttgttgatgatgaagaCAAAGAAATTGATGATTTGTCATAG 1521 0.3215 MLSLKMTEMWTTMGSTLASFMFIWAIIRQYCPYQLLRFFEKYSHRIMDYFYPYIRISFHEFLGDRLKRSDAYGAVEAYLSANTSKSAKRLKAEIGKDSTNLVLTMDEYERVTDDYKGVKVYWVCSKVMSASRSMPYYQEQEKRFYKLTFHKKYRDTITGSYLDHVMKEGKEIRLRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFETMAMEPEKKKEIIEDLVTFSKSKDFYARIGKAWKRGYLLFGPPGTGKSTMIAAMANLLGYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGESKFFSDDENENKVSLDALRKEVKEEGSGGGNSKVTLSGLLNFIDGIWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCSFNGFKVLANNYLRVDNHVLFESIEKLIGEVKITPADVAENLMPKSPMDDADKCLSNLIEALEEMKQCSKIKEQGDEVEHIGAIKENGKFVDDEDKEIDDLS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03633 506 CDD AAA 244 403 - -
Tsu04g03633 506 ProSitePatterns AAA-protein family signature. 373 392 IPR003960 GO:0005524|GO:0016887
Tsu04g03633 506 Pfam Domain associated at C-terminal with AAA 32 124 IPR025753 -
Tsu04g03633 506 PANTHER BCS1 AAA-TYPE ATPASE 7 487 - -
Tsu04g03633 506 SMART AAA_5 243 405 IPR003593 -
Tsu04g03633 506 Gene3D - 399 466 - -
Tsu04g03633 506 PANTHER ATP BINDING PROTEIN 7 487 - -
Tsu04g03633 506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 462 IPR027417 -
Tsu04g03633 506 Pfam ATPase family associated with various cellular activities (AAA) 248 402 IPR003959 GO:0005524|GO:0016887
Tsu04g03633 506 Gene3D - 203 398 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03633 Tsu-Chr4 45413030 45414742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03633 208 401 Miscellaneous Gene Families AT5G58870 29.208 2.45e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03633 - - gmx:100798981 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03633 04 45413030 45414742 Tsu04g03633 04 45413030 45414742 ECH