Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03630 atgatgatgacgacgacGAAGAGagcaagaacaacaacaaaggTACAAAACTTGTTCTTCTCTTTATGTAGACAAAGATCTTTTCACATTCTCATCATCATCGCTGTTTTCTATGTTCTTCTTTTCACCCTCGAAATCCCTTTCGTTTTCAACAAAACCGCCGCCGCCACTCGTTCCGAAAGAAACGCTttagaacaacaacaacagcttCAACCGAGTCAGACAACTCAACTCACTCGCCACCGAAACAATcataatttgattttatctgGATTGGTCCTAAACGACGCCGCATTTGAATCAGAAGTTTATCAATCAGCGTGTAGAGTTGGAAAACGGGTTTGGGAAGAACTTCAATTAGCGAAAACCCCAGTTCAAAACGGTGTCGTTTTGAAACCGGAGAATTTAACCGGGTTATGTCCGCGTTCTGTTTGGGTTACCGGGTCGGATTTTGTTGGGAATGGTAGTTTGTTGGTGATTCCTTGTGGGTTGACTTTAGGGTCACATATAACGGTTGTTGGGAAACCGTTGAGAGATGGGGATGGGAAAAAGTCTCAATTTGTGATGGAGTTGCAAGGTTTGAAAACTGTTGAAGGTGAAGAGCCACCTAGGATATTGCATTTCAATCCTAGGTTGAAAGGGGATTGGAGTGGTAAACCTGTTATTGAGCTTAATACTTGTTATAGGATGCAGTGGGGTACTTCTTTGCGTTGTGATGGTTGGAAATCTAGGGCTGATCAAGATACTGTTGATGGGTTGGTGAAGTGTGAGAAGTGGATTGGGGGAGAATCAGGAGATGATAGGCAAGCGGTGGAGTCGAAATCAGAATGGTGGTTGAAGAGACTCATAGGCCGGACAAAAAAAGTAACAGTTGATTGGCCATTCCCATTTAACGAGAACAAGCTATTTGTTCTTACTCTTAGCGCTGGATTGGAGGGATATCATTTTAATGATGATGGGAGGCATGTGGCCTCTTTTCCTTATCGCACTGGCTTTACTCTTGAGGATGCTACTGGACTCACTGTAAAAGGAAATATTGATGTCCATTCTATATTTGCTGCCTCCTTGCCTTCAACGCATCCTAGTATTTCGCCACAGCAGCACCTTGATTTTTCAACCAGATGGCGCGCCCCACCACTACCTGAATTTGGCGTGGAATTGTTCATCGGCATCCTGTCAGCTGGAAACCATTTTGCTGAGCGGATGGCTGTAAGAAAGTCATGGATGCAGCATAGCCTTATAAAATCTTCAGAAGTGGTGGCTCGTTTCTTTGTAGCACTGcaccagaaaatagaaattaattcAGAGTTGAAGAAGGAAGCAGAATTTTTCGGGGATATTGTTATAGTGCCTTACATGGATAACTATGACCTTGTCGTGTTGAAAACAGTGGCTATATGTGAATATGGGGTTCATACAGTAGCTGCAGGGAACATAATGAAAGGTGATGATGACACATTTGTGAGAGTGGACGCTGTTATAAATGAAGTAAGGAATGTTCCAGATTCTATGAGCTCTTATATTGGGAATATAAATTATTACCACAAACCCTTGCGCCATGGTAAATGGGCTGTGACATATGAGGAGTGGCCAGAAGAGGATTACCCACCATATGCTAATGGGCCGGGGTATATTCTGTCTTATGATATTGCACACTACATTGTGTCTGAATTTGAGAAGCATAAATTAAGGTTGTTCAAAATGGAAGATGTGAGTATGGGAATGTGGGTAGAGCAATTTAACAGCACAAAACCAGTACATTATTCGCATAGCTTAAAGTTCTGCCAGTTTGGGTGTATAGAAGGCTATTACACAGCTCATTACCAATCTCCAAGGCAGATGATGTGCCTTTGGGATAAATTGCAGCGGCATACAAGTCCGCAATGCTGCAACATGAGATGA 1902 0.408 MMMTTTKRARTTTKVQNLFFSLCRQRSFHILIIIAVFYVLLFTLEIPFVFNKTAAATRSERNALEQQQQLQPSQTTQLTRHRNNHNLILSGLVLNDAAFESEVYQSACRVGKRVWEELQLAKTPVQNGVVLKPENLTGLCPRSVWVTGSDFVGNGSLLVIPCGLTLGSHITVVGKPLRDGDGKKSQFVMELQGLKTVEGEEPPRILHFNPRLKGDWSGKPVIELNTCYRMQWGTSLRCDGWKSRADQDTVDGLVKCEKWIGGESGDDRQAVESKSEWWLKRLIGRTKKVTVDWPFPFNENKLFVLTLSAGLEGYHFNDDGRHVASFPYRTGFTLEDATGLTVKGNIDVHSIFAASLPSTHPSISPQQHLDFSTRWRAPPLPEFGVELFIGILSAGNHFAERMAVRKSWMQHSLIKSSEVVARFFVALHQKIEINSELKKEAEFFGDIVIVPYMDNYDLVVLKTVAICEYGVHTVAAGNIMKGDDDTFVRVDAVINEVRNVPDSMSSYIGNINYYHKPLRHGKWAVTYEEWPEEDYPPYANGPGYILSYDIAHYIVSEFEKHKLRLFKMEDVSMGMWVEQFNSTKPVHYSHSLKFCQFGCIEGYYTAHYQSPRQMMCLWDKLQRHTSPQCCNMR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03630 633 CDD GLECT 160 352 IPR001079 GO:0030246
Tsu04g03630 633 Pfam Galactosyltransferase 400 580 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tsu04g03630 633 Pfam Galactoside-binding lectin 158 352 IPR001079 GO:0030246
Tsu04g03630 633 SMART Gal_bind_lectin_2 160 353 IPR001079 GO:0030246
Tsu04g03630 633 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 156 354 IPR001079 GO:0030246
Tsu04g03630 633 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 71 633 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tsu04g03630 633 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 16 59 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tsu04g03630 633 SUPERFAMILY Concanavalin A-like lectins/glucanases 158 352 IPR013320 -
Tsu04g03630 633 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE GALT5 71 633 - -
Tsu04g03630 633 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE GALT5 16 59 - -
Tsu04g03630 633 Gene3D - 156 352 - -
Tsu04g03630 633 Gene3D - 384 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03630 Tsu-Chr4 45394879 45398386 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g03630 17 633 Glycosyltransferase AT1G74800 61.388 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03630 K20843 - gmx:100800292 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03630 04 45394879 45398386 Tsu04g03630 04 45394879 45398386 ECH