Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03625 atGGCAACCCGACCTATTACTAGTTTTATTGAGCAATACTTAGGAAAGTTTCCACATTTTGTGTTATGTATGGTGCTTGATTGGGTGTTGACAATTTCATTCTTCATTGATGGGTTTCTATCATTTTTCACCACTGAGTTTGCAAGGTTCTTTGGTTTGGATATCCCTTGTTGGTTATGTGCCAAGATGAATAATGTCATGGCTCAAAAGAATCCTAAATTTTATTACAACCATTCCATGTGCGAAACTCATAAGAAAGACGTTTCGTATTTGGTGTTTTGTCACAATCACAAGAAGATTTCTGATATAAGGAAGATGTGTGAAGGATGTTTGCTTTCATTTGCAACGCAGAAGGAATCGGATTGTGATACCTATAAGTCTCTTGTAGGGGTTCTGAATAGGAATCTCGAGGTTGAGAAAAGCAGTACTCAGATGTGTTCATGTTGTGAAGAACCATTGAAACTCAAGTCTTCCAtctcaaaattcaaaaactCAGGTCCATTCGTCATGTCAAAATATGAGGAATCTTGCGATCTGGATTCGCCTCAAATCATGTATGCGGAAAAAGATTCCGAGCTTCCAAAGAATGAGGATGACAACAATCTGAAAAATCAGAATATTAAATTAAAGGAAGTATTGAAAGGCACCTCTTTGCCTCCATTGGCAAAATCCGGTGTAGAGTCCCCGAAAACACCTTCTTTGCCATGGGGAAACAGGATCTTGGGAGTCCCACTTACAGATTCTCCATACACCAGTCCAAGATGGTCTTCCAGGGAAAGCAGGAGATCATCTCTAGATAAGACAGAAATTGCCTCTGTCTCTACCGATGGGGATTATCAAAATGAAGAAGACAGTGCCGTCTTAAACAAGTTGAAGAAGCAAGTCCGTTTGGATCGCAAGTCTGTCATGGCTTTGTGCACAGAGCTCGATGAAGAGAGAAGTGCTTCAGCTGTTGCTGCCAACAATGCAATGGCCATGATCACGCGCTTACAGGAAGAGAAAGCGGCTTTGCAGATGGATACTTCACAGTATCAAAGAATGATGGAAGACCAAATAGAGTATGATGAAGAGGTCTTGCAAGAAACTAATGATTTGCTTATCAAACTAGAGGAAGAAGTCAAAACTTTAGATACTGAATTGGAgatttatagaaataaatatgGATACTTGACAAGAGACGATATTATGGCTCATGGTGGCAGCAACTTTTCAACTAGGTCCATTGAAGGTGAGGATGATGTGGAGAAAGACCTTGATCTTGATCAACCTGCTTCGCCACAGGTAGATAATGGAGGGGGAAAGATCAAGGAGACACTAAAAGATTTCAGAATGGAAAGAACATATCTTCTCGGCATGAAGAAAATGGAAAACGGAACTCTCTTGACAGAGAATGAAATCTGA 1401 0.3954 MATRPITSFIEQYLGKFPHFVLCMVLDWVLTISFFIDGFLSFFTTEFARFFGLDIPCWLCAKMNNVMAQKNPKFYYNHSMCETHKKDVSYLVFCHNHKKISDIRKMCEGCLLSFATQKESDCDTYKSLVGVLNRNLEVEKSSTQMCSCCEEPLKLKSSISKFKNSGPFVMSKYEESCDLDSPQIMYAEKDSELPKNEDDNNLKNQNIKLKEVLKGTSLPPLAKSGVESPKTPSLPWGNRILGVPLTDSPYTSPRWSSRESRRSSLDKTEIASVSTDGDYQNEEDSAVLNKLKKQVRLDRKSVMALCTELDEERSASAVAANNAMAMITRLQEEKAALQMDTSQYQRMMEDQIEYDEEVLQETNDLLIKLEEEVKTLDTELEIYRNKYGYLTRDDIMAHGGSNFSTRSIEGEDDVEKDLDLDQPASPQVDNGGGKIKETLKDFRMERTYLLGMKKMENGTLLTENEI 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03625 466 Coils Coil 320 347 - -
Tsu04g03625 466 Pfam Zein-binding 290 380 IPR007656 -
Tsu04g03625 466 MobiDBLite consensus disorder prediction 220 239 - -
Tsu04g03625 466 MobiDBLite consensus disorder prediction 400 434 - -
Tsu04g03625 466 ProSiteProfiles GTD-binding domain profile. 286 384 IPR007656 -
Tsu04g03625 466 PANTHER MYOSIN-BINDING PROTEIN 2 1 457 IPR039306 GO:0017022
Tsu04g03625 466 Coils Coil 352 386 - -
Tsu04g03625 466 PANTHER MYOSIN-BINDING PROTEIN 6-RELATED 1 457 - -
Tsu04g03625 466 MobiDBLite consensus disorder prediction 247 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03625 Tsu-Chr4 45360901 45363061 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03625 - - lja:Lj4g3v1598220.1 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03625 04 45360901 45363061 Tsu04g03625 04 45360901 45363061 ECH